Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1116813	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12531458	0.96[ASN][1000 genomes]
rs12531476	0.87[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12531789	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12534015	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12540036	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12701690	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13244920	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1358422	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1527949	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17171520	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17171521	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17171527	0.81[EUR][1000 genomes]
rs34013745	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34191717	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35218421	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35319478	0.82[EUR][1000 genomes]
rs4512300	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9691458	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9719863	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024142	chr7:38978728-39300444	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39082400-39094000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr7:39091800-39097800	Weak transcription	Aorta	Aorta
3	chr7:39092400-39094000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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