Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10092060	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10096514	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1034515	0.87[EUR][1000 genomes]
rs1034516	0.86[EUR][1000 genomes]
rs12549329	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13252402	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13252902	0.87[EUR][1000 genomes]
rs1511026	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1511027	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2203040	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2326444	0.90[EUR][1000 genomes]
rs4305887	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4354297	0.88[EUR][1000 genomes]
rs6471818	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6471819	0.88[EUR][1000 genomes]
rs6471820	0.88[EUR][1000 genomes]
rs6982408	0.90[EUR][1000 genomes]
rs6983076	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6997129	0.87[EUR][1000 genomes]
rs6999126	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7017889	0.88[EUR][1000 genomes]
rs7832367	0.82[EUR][1000 genomes]
rs7836012	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7836602	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv890942	chr8:60639357-60686330	Enhancers Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60672200-60674600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:60674400-60675000	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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