Variant report

Variant rs12574979
Chromosome Location chr11:86527151-86527152
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86514000-86530000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr11:86516600-86527200 Weak transcription Adipose Nuclei Adipose
3 chr11:86516800-86527200 Weak transcription Left Ventricle heart
4 chr11:86517200-86529800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr11:86520000-86549200 Weak transcription Ovary ovary
6 chr11:86521000-86551400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr11:86521600-86528400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr11:86521800-86527800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:86522800-86544400 Weak transcription Fetal Kidney kidney
10 chr11:86523400-86527200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr11:86523400-86527200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr11:86523800-86528400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:86524800-86527400 Enhancers HUVEC blood vessel
14 chr11:86525000-86527600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr11:86525200-86528200 Enhancers HMEC breast
16 chr11:86525200-86528800 Enhancers Placenta Amnion Placenta Amnion
17 chr11:86525200-86529200 Enhancers HSMM muscle
18 chr11:86525200-86530400 Enhancers Muscle Satellite Cultured Cells --
19 chr11:86525200-86531000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr11:86525400-86527400 Enhancers Aorta Aorta
21 chr11:86525400-86527600 Enhancers Skeletal Muscle Male skeletal muscle
22 chr11:86525400-86527600 Enhancers Skeletal Muscle Female skeletal muscle
23 chr11:86525400-86527600 Enhancers NHLF lung
24 chr11:86525400-86527800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr11:86525400-86527800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr11:86525400-86527800 Enhancers NHDF-Ad bronchial
27 chr11:86525600-86527400 Enhancers Psoas Muscle Psoas
28 chr11:86525600-86527400 Enhancers Right Atrium heart
29 chr11:86525600-86527400 Enhancers NH-A brain
30 chr11:86525600-86527600 Enhancers Duodenum Smooth Muscle Duodenum
31 chr11:86525600-86527800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:86525600-86527800 Enhancers Fetal Stomach stomach
33 chr11:86525600-86528000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr11:86525600-86528000 Enhancers Osteobl bone
35 chr11:86525600-86529400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:86525800-86527800 Enhancers NHEK skin
37 chr11:86525800-86530200 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr11:86525800-86530400 Enhancers Hela-S3 cervix
39 chr11:86525800-86530800 Enhancers Rectal Smooth Muscle rectum
40 chr11:86526000-86528000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr11:86526000-86528000 Enhancers Stomach Smooth Muscle stomach
42 chr11:86526000-86529400 Weak transcription Fetal Heart heart
43 chr11:86526000-86529400 Weak transcription Fetal Lung lung
44 chr11:86526200-86527600 Enhancers Rectal Mucosa Donor 31 rectum
45 chr11:86526400-86527200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:86526400-86529000 Weak transcription Fetal Muscle Leg muscle
47 chr11:86526600-86527400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr11:86526600-86527800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr11:86526800-86527200 Enhancers Placenta Placenta
50 chr11:86526800-86527400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links