The 2.0 version of rSNPBase

Variant report

Variant rs12421942
Chromosome Location chr11:86508487-86508488
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86495400-86510400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:86497000-86510000 Weak transcription Rectal Smooth Muscle rectum
3 chr11:86502400-86509800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr11:86502400-86510800 Weak transcription Fetal Intestine Large intestine
5 chr11:86502600-86511000 Weak transcription Fetal Kidney kidney
6 chr11:86503400-86510400 Weak transcription Fetal Lung lung
7 chr11:86503600-86510600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr11:86503600-86510800 Weak transcription Pancreas Pancrea
9 chr11:86504600-86510800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr11:86504600-86511000 Weak transcription Psoas Muscle Psoas
11 chr11:86505200-86510400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr11:86505600-86510600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr11:86505600-86510800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr11:86506800-86510800 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr11:86507000-86510200 Enhancers Hela-S3 cervix
16 chr11:86507200-86509000 Enhancers A549 lung
17 chr11:86507200-86510000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:86507200-86510800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr11:86507400-86510200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:86507400-86510200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr11:86507400-86510200 Weak transcription HMEC breast
22 chr11:86507400-86510400 Weak transcription NHEK skin
23 chr11:86508000-86510000 Weak transcription HUVEC blood vessel
24 chr11:86508200-86510800 Weak transcription Fetal Stomach stomach
25 chr11:86508200-86510800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:86508400-86508600 Enhancers Rectal Mucosa Donor 31 rectum
27 chr11:86508400-86508600 Enhancers Sigmoid Colon Sigmoid Colon
28 chr11:86508400-86508600 Enhancers NHDF-Ad bronchial
29 chr11:86508400-86510800 Weak transcription Fetal Heart heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015