The 2.0 version of rSNPBase

Variant report

Variant rs1260419
Chromosome Location chr1:150390524-150390525
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:150359200-150392000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:150360000-150390800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:150362600-150416600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:150370000-150407800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:150372200-150393200 Weak transcription Stomach Smooth Muscle stomach
10 chr1:150373200-150390800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:150373200-150390800 Weak transcription Fetal Lung lung
12 chr1:150373200-150390800 Weak transcription Fetal Muscle Leg muscle
13 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:150373400-150390600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:150373400-150390600 Weak transcription Fetal Stomach stomach
16 chr1:150378800-150395200 Weak transcription Hela-S3 cervix
17 chr1:150379000-150390600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:150379200-150391200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:150379400-150392400 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:150380200-150394800 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:150380600-150429800 Weak transcription Aorta Aorta
22 chr1:150381200-150414400 Weak transcription Fetal Brain Female brain
23 chr1:150381600-150391000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:150381800-150393200 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:150381800-150398400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:150381800-150401200 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr1:150381800-150417400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:150382000-150390800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:150382000-150418200 Weak transcription Colonic Mucosa Colon
30 chr1:150382000-150432400 Weak transcription Fetal Brain Male brain
31 chr1:150382400-150407800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:150382600-150390800 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:150382600-150414400 Weak transcription Lung lung
34 chr1:150382800-150412800 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:150382800-150414600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr1:150382800-150414800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:150383000-150390800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:150383000-150390800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:150383000-150390800 Weak transcription HSMM muscle
40 chr1:150383000-150393200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:150383000-150416600 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:150383200-150395000 Weak transcription K562 blood
43 chr1:150383400-150390600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:150383400-150390800 Weak transcription Adipose Nuclei Adipose
45 chr1:150383400-150391600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:150383400-150401000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:150383400-150413800 Weak transcription Brain Hippocampus Middle brain
48 chr1:150383400-150414000 Weak transcription NH-A brain
49 chr1:150383400-150414200 Weak transcription Left Ventricle heart
50 chr1:150383400-150414200 Weak transcription Osteobl bone

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Last update: Aug 31, 2015