The 2.0 version of rSNPBase

Variant report

Variant rs1260458
Chromosome Location chr1:150347454-150347455
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150348800 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
4 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
5 chr1:150339600-150349400 Weak transcription Fetal Stomach stomach
6 chr1:150339600-150356400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:150339600-150359800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:150339800-150368600 Weak transcription Primary hematopoietic stem cells blood
10 chr1:150339800-150390000 Weak transcription Thymus Thymus
11 chr1:150340000-150362000 Weak transcription Primary B cells from cord blood blood
12 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:150340200-150347600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:150340200-150348600 Enhancers Primary T helper cells fromperipheralblood blood
15 chr1:150340600-150347600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:150340600-150366800 Weak transcription Fetal Brain Female brain
17 chr1:150341400-150348400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:150342600-150348600 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr1:150342600-150348600 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr1:150342600-150349600 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr1:150342800-150361600 Weak transcription Fetal Thymus thymus
22 chr1:150343400-150348000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:150343400-150378000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:150343600-150348000 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:150343600-150349800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr1:150343600-150361400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:150343800-150359400 Weak transcription Duodenum Mucosa Duodenum
28 chr1:150343800-150378600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:150344000-150361600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:150344200-150348800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr1:150344600-150349000 Enhancers HepG2 liver
32 chr1:150345000-150348400 Enhancers Fetal Heart heart
33 chr1:150345000-150348600 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr1:150345200-150350600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:150345400-150351200 Weak transcription Fetal Intestine Small intestine
36 chr1:150345400-150358600 Weak transcription Fetal Intestine Large intestine
37 chr1:150346000-150348800 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr1:150346200-150347600 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:150346200-150347800 Enhancers Primary T cells from cord blood blood
40 chr1:150346200-150348000 Enhancers Colon Smooth Muscle Colon
41 chr1:150346200-150348600 Enhancers Brain Angular Gyrus brain
42 chr1:150346200-150348600 Enhancers Brain Inferior Temporal Lobe brain
43 chr1:150346200-150348600 Enhancers Fetal Kidney kidney
44 chr1:150346200-150349000 Enhancers Brain Hippocampus Middle brain
45 chr1:150346400-150347800 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr1:150346400-150348000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:150346400-150348400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:150346400-150348400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr1:150346400-150348600 Enhancers Cortex derived primary cultured neurospheres brain
50 chr1:150346400-150348800 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015