The 2.0 version of rSNPBase

Variant report

Variant rs1260368
Chromosome Location chr1:150340260-150340261
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150335800-150340600 Active TSS GM12878-XiMat blood
2 chr1:150336000-150340400 Active TSS Hela-S3 cervix
3 chr1:150338400-150343800 Weak transcription Spleen Spleen
4 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:150338800-150343000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:150338800-150343200 Weak transcription Esophagus oesophagus
7 chr1:150338800-150346800 Weak transcription Lung lung
8 chr1:150339000-150342600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:150339400-150341400 Weak transcription Stomach Mucosa stomach
10 chr1:150339400-150341600 Weak transcription Pancreas Pancrea
11 chr1:150339400-150342600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:150339400-150346400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:150339400-150346400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:150339400-150346600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr1:150339400-150348800 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
17 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
18 chr1:150339600-150340600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr1:150339600-150340600 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:150339600-150340600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:150339600-150340600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:150339600-150340600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:150339600-150340600 Enhancers Fetal Brain Male brain
24 chr1:150339600-150340800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr1:150339600-150341400 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:150339600-150341600 Weak transcription Fetal Intestine Large intestine
27 chr1:150339600-150342400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:150339600-150342600 Weak transcription Fetal Thymus thymus
29 chr1:150339600-150343000 Weak transcription Psoas Muscle Psoas
30 chr1:150339600-150343000 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:150339600-150343200 Weak transcription Left Ventricle heart
32 chr1:150339600-150343400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:150339600-150344800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:150339600-150344800 Weak transcription Primary B cells from peripheral blood blood
35 chr1:150339600-150345200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:150339600-150345200 Weak transcription Ovary ovary
37 chr1:150339600-150345800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:150339600-150346000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:150339600-150346400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:150339600-150346400 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:150339600-150346400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:150339600-150346400 Weak transcription Right Atrium heart
43 chr1:150339600-150346600 Weak transcription Small Intestine intestine
44 chr1:150339600-150349400 Weak transcription Fetal Stomach stomach
45 chr1:150339600-150356400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:150339600-150359800 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:150339800-150340400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:150339800-150340400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:150339800-150340600 Enhancers Primary T cells from cord blood blood

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Last update: Aug 31, 2015