Variant report

Variant	rs1694377
Chromosome Location	chr1:150293153-150293154
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5)
CpG islands
(count:0)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:5 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUN	chr1:150293077-150294782	K562	blood:	n/a	n/a
2	HCFC1	chr1:150293139-150295590	Hela-S3	cervix:	n/a	n/a
3	POLR2A	chr1:150293130-150294889	HepG2	liver:	n/a	n/a
4	POLR2A	chr1:150293015-150293217	ProgFib	skin:	n/a	n/a
5	POLR2A	chr1:150293092-150293563	HUVEC	blood vessel:	n/a	n/a

No data

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:150207682..150210552-chr1:150291812..150294121,3	K562	blood:
2	chr1:150291489..150302169-chr1:150333998..150340807,28	MCF-7	breast:
3	chr1:150292363..150295488-chr1:150335350..150339295,4	K562	blood:
4	chr1:150291213..150297860-chr1:150334210..150339087,16	MCF-7	breast:
5	chr1:150206959..150209855-chr1:150291649..150295634,4	MCF-7	breast:
6	chr1:149869289..149872659-chr1:150292468..150294685,3	MCF-7	breast:
7	chr1:150264700..150268461-chr1:150290358..150296338,12	MCF-7	breast:
8	chr1:150292375..150296656-chr1:150333833..150339442,8	K562	blood:
9	chr1:150264361..150267747-chr1:150292578..150295568,3	K562	blood:
10	chr1:149857707..149859573-chr1:150292881..150294813,2	MCF-7	breast:
11	chr1:150253619..150256471-chr1:150290811..150295516,7	MCF-7	breast:
12	chr1:150207085..150210384-chr1:150292615..150294360,3	K562	blood:
13	chr1:150264496..150269056-chr1:150292330..150296241,7	MCF-7	breast:
14	chr1:145504895..145507513-chr1:150292334..150294058,2	MCF-7	breast:
15	chr1:150265031..150267516-chr1:150292699..150295000,3	K562	blood:
16	chr1:150287668..150290744-chr1:150291227..150293321,4	MCF-7	breast:
17	chr1:150254416..150258326-chr1:150293142..150296194,3	K562	blood:
18	chr1:150252171..150257673-chr1:150291650..150295636,15	MCF-7	breast:
19	chr1:150292681..150294454-chr19:1247452..1249976,2	MCF-7	breast:

No data

Variant related genes	Relation type
PRPF3	TF binding region
ENSG00000178096	Chromatin interaction
ENSG00000184678	Chromatin interaction
ENSG00000159208	Chromatin interaction
ENSG00000234222	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000167470	Chromatin interaction
ENSG00000222222	Chromatin interaction
ENSG00000143401	Chromatin interaction
ENSG00000163125	Chromatin interaction
ENSG00000187145	Chromatin interaction
ENSG00000184260	Chromatin interaction

Extended variants
information (count: 178 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:176)

rs_ID	r²[population]
rs1097067	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1097068	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1097070	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1103115	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11205357	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11205359	0.92[ASN][1000 genomes]
rs11205373	0.86[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs11205385	0.96[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1122967	0.89[ASN][1000 genomes]
rs1145583	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11577600	1.00[CEU][hapmap];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11577843	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11581351	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11587116	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11587575	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11587758	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11590324	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11590787	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12023378	0.83[ASN][1000 genomes]
rs12028001	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12029359	0.84[CHB][hapmap];1.00[YRI][hapmap]
rs12040949	0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12042229	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12042579	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12045304	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12046446	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12046899	0.84[CHB][hapmap]
rs12057558	1.00[YRI][hapmap]
rs1260367	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1260368	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1260378	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1260386	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1260388	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1260389	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1260394	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1260396	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1260398	0.92[ASN][1000 genomes]
rs1260400	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1260404	0.94[ASN][1000 genomes]
rs1260405	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1260406	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1260407	0.92[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1260409	0.92[ASN][1000 genomes]
rs1260411	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1260421	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1260422	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1260458	0.93[ASN][1000 genomes]
rs1260459	1.00[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1313570	0.93[ASN][1000 genomes]
rs13294	0.96[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap]
rs1498308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1614039	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1617829	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1625468	0.96[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1627235	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1631973	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1694362	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1694363	0.83[ASN][1000 genomes]
rs1694364	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1694369	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1694370	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1694375	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1694380	0.92[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1694381	0.99[ASN][1000 genomes]
rs1694385	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1694390	0.87[ASN][1000 genomes]
rs1747927	0.98[ASN][1000 genomes]
rs17596326	0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17597088	0.82[ASN][1000 genomes]
rs1776273	0.92[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1776274	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1776276	0.96[ASN][1000 genomes]
rs1932934	0.85[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs1972031	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2147324	1.00[CHB][hapmap];0.88[JPT][hapmap];0.88[ASN][1000 genomes]
rs2264418	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2274127	0.82[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.88[ASN][1000 genomes]
rs2454285	0.97[ASN][1000 genomes]
rs2454286	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2477121	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2762860	0.87[ASN][1000 genomes]
rs2794614	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2794615	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2794678	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2794679	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2794681	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2794682	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2794684	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2794685	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2797653	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2867893	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2867894	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2873669	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3125808	0.94[ASN][1000 genomes]
rs35057759	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3737240	0.88[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap]
rs3738487	0.96[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs3820544	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3896342	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4333886	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4446975	0.85[CHB][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs4451552	0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs45595332	0.83[ASN][1000 genomes]
rs4581308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs471464	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs471738	0.92[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs486275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs488271	0.92[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs4926394	0.89[ASN][1000 genomes]
rs4926395	0.86[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4926422	0.94[ASN][1000 genomes]
rs4926436	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4926437	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4970971	0.82[ASN][1000 genomes]
rs497128	0.82[ASN][1000 genomes]
rs500812	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs509345	0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs519126	0.97[ASN][1000 genomes]
rs521607	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs522435	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs543179	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs55742549	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55823828	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55928222	0.81[AMR][1000 genomes]
rs56214461	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs578353	0.92[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs580060	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs580159	0.92[ASN][1000 genomes]
rs6662108	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6672808	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6685252	0.88[ASN][1000 genomes]
rs6703652	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs696616	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs696618	0.92[CEU][hapmap];0.94[JPT][hapmap]
rs698913	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs698916	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs698918	0.91[ASN][1000 genomes]
rs698919	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs698923	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7002	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72696885	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72696900	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7511649	0.92[CHB][hapmap];1.00[YRI][hapmap]
rs7512552	1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7513205	0.96[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7517441	0.96[CEU][hapmap];0.92[CHB][hapmap];0.93[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7523428	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7538981	0.83[ASN][1000 genomes]
rs7539458	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7548085	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs7553867	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7554686	0.92[CHB][hapmap];0.94[JPT][hapmap];0.87[ASN][1000 genomes]
rs8006	0.92[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs828783	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs832621	0.89[ASN][1000 genomes]
rs832622	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs834228	0.87[ASN][1000 genomes]
rs834229	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs834230	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs834231	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs834232	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs834233	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs834234	0.85[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs834236	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs834241	0.89[ASN][1000 genomes]
rs834242	0.85[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs834243	0.91[ASN][1000 genomes]
rs844309	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9435997	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9436007	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9436008	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9436108	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9436112	0.96[CEU][hapmap];0.94[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9436115	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9436119	0.83[ASN][1000 genomes]
rs9436127	0.96[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529719	chr1:150006344-150311095	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv916014	chr1:150187139-150537483	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1694377	MRPS21	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:150267000-150293200	Weak transcription	Stomach Mucosa	stomach
2	chr1:150268000-150293200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr1:150276000-150293200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr1:150276000-150293200	Weak transcription	Dnd41	blood
5	chr1:150276400-150293200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr1:150276400-150293200	Weak transcription	Fetal Kidney	kidney
7	chr1:150278800-150293400	Weak transcription	NHDF-Ad	bronchial
8	chr1:150280600-150293200	Weak transcription	GM12878-XiMat	blood
9	chr1:150280800-150293200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr1:150280800-150293200	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr1:150280800-150293200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
12	chr1:150280800-150293200	Weak transcription	Rectal Smooth Muscle	rectum
13	chr1:150280800-150293200	Weak transcription	HUVEC	blood vessel
14	chr1:150280800-150293400	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr1:150281000-150293200	Weak transcription	Primary B cells from cord blood	blood
16	chr1:150281000-150293200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr1:150281000-150293200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr1:150281000-150293200	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr1:150281000-150293200	Weak transcription	Colon Smooth Muscle	Colon
20	chr1:150281000-150293200	Weak transcription	Spleen	Spleen
21	chr1:150281000-150293200	Weak transcription	HMEC	breast
22	chr1:150281400-150293200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr1:150281400-150293200	Weak transcription	Primary hematopoietic stem cells	blood
24	chr1:150281400-150293200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
25	chr1:150281400-150293200	Weak transcription	Primary T helper cells fromperipheralblood	blood
26	chr1:150281400-150293200	Weak transcription	Liver	Liver
27	chr1:150281400-150293200	Weak transcription	Brain Hippocampus Middle	brain
28	chr1:150281400-150293200	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr1:150281400-150293200	Weak transcription	Left Ventricle	heart
30	chr1:150281400-150293200	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr1:150281400-150293200	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr1:150281400-150293200	Weak transcription	Osteobl	bone
33	chr1:150281400-150293400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr1:150281600-150293600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr1:150282400-150293200	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr1:150282600-150293200	Weak transcription	HUES48 Cell Line	embryonic stem cell
37	chr1:150282600-150293200	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr1:150282600-150293200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr1:150282600-150293200	Weak transcription	Brain Anterior Caudate	brain
40	chr1:150282800-150293200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr1:150282800-150293200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr1:150282800-150293200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr1:150282800-150293200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr1:150282800-150293200	Weak transcription	Primary B cells from peripheral blood	blood
45	chr1:150282800-150293200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr1:150282800-150293200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr1:150282800-150293200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr1:150282800-150293200	Weak transcription	Adipose Nuclei	Adipose
49	chr1:150282800-150293200	Weak transcription	Fetal Intestine Large	intestine
50	chr1:150282800-150293200	Weak transcription	Fetal Thymus	thymus

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