The 2.0 version of rSNPBase

Variant report

Variant rs11205359
Chromosome Location chr1:150277387-150277388
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150267000-150280000 Weak transcription Rectal Smooth Muscle rectum
2 chr1:150267000-150280000 Weak transcription Small Intestine intestine
3 chr1:150267000-150284000 Weak transcription Brain Substantia Nigra brain
4 chr1:150267000-150293200 Weak transcription Stomach Mucosa stomach
5 chr1:150267200-150280000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:150267200-150280000 Weak transcription Esophagus oesophagus
7 chr1:150267200-150286400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:150267600-150277800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:150267800-150280800 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr1:150267800-150281400 Strong transcription Liver Liver
11 chr1:150267800-150282000 Strong transcription Fetal Muscle Trunk muscle
12 chr1:150268000-150281000 Strong transcription Fetal Muscle Leg muscle
13 chr1:150268000-150281400 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr1:150268000-150282600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:150268000-150293200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr1:150268200-150278800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:150268200-150279800 Weak transcription Pancreas Pancrea
18 chr1:150268200-150282600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:150268200-150282600 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr1:150268200-150282800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:150268200-150282800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:150268200-150282800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:150268600-150281000 Weak transcription Fetal Brain Male brain
24 chr1:150269000-150281400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:150269000-150282800 Strong transcription Fetal Thymus thymus
26 chr1:150269200-150277600 Weak transcription NHDF-Ad bronchial
27 chr1:150269400-150282800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:150270600-150277800 Strong transcription Fetal Intestine Large intestine
29 chr1:150271600-150284000 Weak transcription Colonic Mucosa Colon
30 chr1:150272600-150282800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:150273400-150278800 Strong transcription Primary B cells from cord blood blood
32 chr1:150273600-150280800 Strong transcription Thymus Thymus
33 chr1:150274000-150278000 Strong transcription Fetal Lung lung
34 chr1:150274000-150282800 Strong transcription Fetal Brain Female brain
35 chr1:150274400-150281000 Strong transcription Primary T cells from cord blood blood
36 chr1:150274600-150278200 Strong transcription HUVEC blood vessel
37 chr1:150274800-150279800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:150274800-150282800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr1:150274800-150284600 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr1:150275000-150278200 Strong transcription Brain Cingulate Gyrus brain
41 chr1:150275000-150278400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:150275000-150280000 Weak transcription Ovary ovary
43 chr1:150275000-150280000 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:150275000-150280200 Weak transcription Brain Hippocampus Middle brain
45 chr1:150275000-150286400 Weak transcription HepG2 liver
46 chr1:150275200-150277800 Weak transcription Stomach Smooth Muscle stomach
47 chr1:150275200-150279600 Weak transcription Lung lung
48 chr1:150275200-150279800 Weak transcription Left Ventricle heart
49 chr1:150275200-150280000 Weak transcription Gastric stomach
50 chr1:150275200-150280000 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015