The 2.0 version of rSNPBase

Variant report

Variant rs828784
Chromosome Location chr1:150335240-150335241
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150305600-150336200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:150308200-150335600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:150319200-150335600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:150320200-150335400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:150320200-150335400 Weak transcription Right Ventricle heart
6 chr1:150320200-150336200 Weak transcription Gastric stomach
7 chr1:150324800-150335400 Weak transcription Colonic Mucosa Colon
8 chr1:150325600-150335600 Weak transcription Small Intestine intestine
9 chr1:150326000-150335400 Weak transcription Brain Substantia Nigra brain
10 chr1:150326200-150335400 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:150326200-150335400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:150326200-150335400 Weak transcription Brain Hippocampus Middle brain
13 chr1:150326200-150335600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:150326200-150335600 Weak transcription Aorta Aorta
15 chr1:150326200-150336000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:150326400-150335400 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:150326400-150335400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:150326400-150335400 Weak transcription Brain Anterior Caudate brain
19 chr1:150326600-150335400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:150326600-150335400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:150326600-150335400 Weak transcription Brain Cingulate Gyrus brain
22 chr1:150326600-150335400 Weak transcription NHLF lung
23 chr1:150326600-150335600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:150326600-150335600 Weak transcription Primary B cells from cord blood blood
25 chr1:150326600-150335600 Weak transcription Colon Smooth Muscle Colon
26 chr1:150326800-150335400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:150327000-150336000 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:150327200-150335400 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:150327200-150335400 Weak transcription Fetal Brain Female brain
30 chr1:150327200-150335400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:150327200-150335600 Weak transcription Spleen Spleen
32 chr1:150327600-150335400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:150327600-150335600 Weak transcription Lung lung
34 chr1:150327600-150335600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:150327800-150335400 Weak transcription HMEC breast
36 chr1:150328000-150335400 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:150328000-150335400 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:150328000-150335400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:150328000-150335400 Weak transcription HSMMtube muscle
40 chr1:150328000-150335600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:150328000-150335600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:150328000-150335600 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr1:150328000-150335600 Weak transcription Left Ventricle heart
44 chr1:150328000-150335600 Weak transcription Ovary ovary
45 chr1:150328000-150336000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:150328200-150335400 Weak transcription Primary B cells from peripheral blood blood
47 chr1:150328200-150335600 Weak transcription Right Atrium heart
48 chr1:150328400-150335600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:150328400-150335600 Weak transcription Liver Liver
50 chr1:150328600-150335400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015