The 2.0 version of rSNPBase

Variant report

Variant rs1260388
Chromosome Location chr1:150372016-150372017
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
3 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
4 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:150339800-150390000 Weak transcription Thymus Thymus
6 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:150343400-150378000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:150343800-150378600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:150347200-150372400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr1:150347200-150380000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr1:150348000-150390400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:150348400-150372600 Weak transcription Hela-S3 cervix
14 chr1:150355600-150382000 Weak transcription Lung lung
15 chr1:150356400-150381400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:150359200-150392000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:150359600-150381200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:150360000-150372800 Weak transcription Adipose Nuclei Adipose
19 chr1:150360000-150375400 Weak transcription Primary T cells from cord blood blood
20 chr1:150360000-150377600 Weak transcription Duodenum Mucosa Duodenum
21 chr1:150360000-150378800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:150360000-150385000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:150360000-150385200 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:150360000-150389600 Weak transcription Dnd41 blood
25 chr1:150360000-150390800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:150360400-150374800 Weak transcription Left Ventricle heart
27 chr1:150360800-150377400 Weak transcription Colon Smooth Muscle Colon
28 chr1:150360800-150387800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:150361800-150378800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:150362200-150377400 Weak transcription Brain Angular Gyrus brain
31 chr1:150362200-150378200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:150362200-150378600 Weak transcription Psoas Muscle Psoas
33 chr1:150362200-150382400 Weak transcription Fetal Kidney kidney
34 chr1:150362400-150372400 Weak transcription Fetal Thymus thymus
35 chr1:150362400-150372800 Weak transcription Primary B cells from peripheral blood blood
36 chr1:150362400-150373400 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:150362400-150375800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:150362400-150380800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:150362400-150381000 Weak transcription Primary B cells from cord blood blood
40 chr1:150362400-150382400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:150362400-150389600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:150362600-150373600 Weak transcription HepG2 liver
43 chr1:150362600-150375800 Weak transcription Liver Liver
44 chr1:150362600-150375800 Weak transcription A549 lung
45 chr1:150362600-150376200 Weak transcription Pancreas Pancrea
46 chr1:150362600-150377400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:150362600-150377800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:150362600-150378000 Weak transcription Fetal Intestine Large intestine
49 chr1:150362600-150378200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr1:150362600-150378200 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015