The 2.0 version of rSNPBase

Variant report

Variant rs1145583
Chromosome Location chr1:150338322-150338323
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150334800-150339800 Active TSS Thymus Thymus
2 chr1:150335200-150338400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr1:150335200-150339200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
4 chr1:150335200-150339200 Active TSS Duodenum Mucosa Duodenum
5 chr1:150335200-150339400 Active TSS Duodenum Smooth Muscle Duodenum
6 chr1:150335200-150339600 Active TSS Stomach Smooth Muscle stomach
7 chr1:150335400-150338600 Active TSS Brain Hippocampus Middle brain
8 chr1:150335400-150338800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:150335400-150338800 Active TSS Esophagus oesophagus
10 chr1:150335400-150339000 Active TSS Fetal Brain Female brain
11 chr1:150335400-150339200 Active TSS Colonic Mucosa Colon
12 chr1:150335400-150339400 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr1:150335400-150339400 Active TSS Pancreatic Islets Pancreatic Islet
14 chr1:150335400-150339400 Active TSS Pancreas Pancrea
15 chr1:150335400-150339600 Active TSS H9 Cell Line embryonic stem cell
16 chr1:150335400-150339600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:150335400-150339600 Active TSS Fetal Intestine Small intestine
18 chr1:150335400-150339600 Active TSS Rectal Mucosa Donor 29 rectum
19 chr1:150335600-150338400 Active TSS Colon Smooth Muscle Colon
20 chr1:150335600-150338800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:150335600-150338800 Active TSS Lung lung
22 chr1:150335600-150338800 Active TSS Small Intestine intestine
23 chr1:150335600-150339000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:150335600-150339000 Active TSS Sigmoid Colon Sigmoid Colon
25 chr1:150335600-150339200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:150335600-150339200 Active TSS Stomach Mucosa stomach
27 chr1:150335600-150339400 Active TSS ES-WA7 Cell Line embryonic stem cell
28 chr1:150335600-150339600 Active TSS Aorta Aorta
29 chr1:150335600-150339600 Active TSS Left Ventricle heart
30 chr1:150335600-150339600 Active TSS Ovary ovary
31 chr1:150335600-150339600 Active TSS Psoas Muscle Psoas
32 chr1:150335600-150339600 Active TSS Right Atrium heart
33 chr1:150335600-150339800 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr1:150335600-150339800 Active TSS Right Ventricle heart
35 chr1:150335600-150340000 Active TSS HUES48 Cell Line embryonic stem cell
36 chr1:150335600-150340000 Active TSS Breast Myoepithelial Primary Cells Breast
37 chr1:150335800-150338400 Active TSS Liver Liver
38 chr1:150335800-150338400 Active TSS Brain Anterior Caudate brain
39 chr1:150335800-150338400 Active TSS Fetal Adrenal Gland Adrenal Gland
40 chr1:150335800-150338400 Active TSS Rectal Mucosa Donor 31 rectum
41 chr1:150335800-150338600 Active TSS Primary T helper cells PMA-I stimulated --
42 chr1:150335800-150338600 Active TSS Brain Substantia Nigra brain
43 chr1:150335800-150338600 Active TSS Skeletal Muscle Male skeletal muscle
44 chr1:150335800-150338600 Active TSS HSMM muscle
45 chr1:150335800-150339000 Active TSS Muscle Satellite Cultured Cells --
46 chr1:150335800-150339000 Active TSS Fetal Lung lung
47 chr1:150335800-150339000 Active TSS Placenta Placenta
48 chr1:150335800-150339000 Active TSS Rectal Smooth Muscle rectum
49 chr1:150335800-150339200 Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr1:150335800-150339200 Active TSS Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015