The 2.0 version of rSNPBase

Variant report

Variant rs9436007
Chromosome Location chr1:150433389-150433390
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:150383400-150443200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:150401400-150448200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:150409800-150437000 Strong transcription Fetal Thymus thymus
5 chr1:150410800-150434400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr1:150411200-150446400 Strong transcription Dnd41 blood
7 chr1:150412000-150443000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:150413400-150436000 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr1:150413600-150446200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr1:150413600-150446400 Strong transcription Primary B cells from peripheral blood blood
11 chr1:150413800-150446000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:150414000-150446400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:150414200-150433600 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr1:150414200-150434200 Strong transcription HUES48 Cell Line embryonic stem cell
15 chr1:150414200-150440800 Strong transcription Fetal Intestine Large intestine
16 chr1:150414400-150442200 Weak transcription Fetal Heart heart
17 chr1:150419200-150441000 Weak transcription HMEC breast
18 chr1:150419200-150442200 Weak transcription NH-A brain
19 chr1:150419200-150443200 Weak transcription Psoas Muscle Psoas
20 chr1:150419800-150434800 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:150422800-150446400 Strong transcription Fetal Stomach stomach
22 chr1:150423000-150436600 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr1:150423800-150447200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:150424800-150446600 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr1:150425200-150446200 Strong transcription Fetal Muscle Trunk muscle
26 chr1:150425600-150435800 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:150425800-150433400 Strong transcription Primary hematopoietic stem cells blood
28 chr1:150425800-150433800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:150425800-150434400 Strong transcription Primary T cells fromperipheralblood blood
30 chr1:150425800-150434600 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:150425800-150434600 Strong transcription Primary T helper cells PMA-I stimulated --
32 chr1:150425800-150435000 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr1:150425800-150445600 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:150425800-150445800 Strong transcription Fetal Muscle Leg muscle
35 chr1:150425800-150447000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:150426800-150438600 Strong transcription Thymus Thymus
37 chr1:150426800-150446400 Strong transcription Fetal Intestine Small intestine
38 chr1:150427000-150438400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:150427400-150438600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:150427800-150436600 Weak transcription K562 blood
41 chr1:150427800-150438000 Weak transcription HSMM muscle
42 chr1:150428400-150443200 Weak transcription Small Intestine intestine
43 chr1:150428600-150434200 Strong transcription Colon Smooth Muscle Colon
44 chr1:150428600-150434800 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr1:150428600-150446400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:150428800-150434200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr1:150428800-150438600 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr1:150429000-150442600 Weak transcription Stomach Mucosa stomach
49 chr1:150429600-150433400 Strong transcription Brain Anterior Caudate brain
50 chr1:150429600-150433400 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015