The 2.0 version of rSNPBase

Variant report

Variant rs1260411
Chromosome Location chr1:150382088-150382089
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:150339800-150390000 Weak transcription Thymus Thymus
4 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:150348000-150390400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:150359200-150392000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:150360000-150385000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:150360000-150385200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:150360000-150389600 Weak transcription Dnd41 blood
11 chr1:150360000-150390800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:150360800-150387800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:150362200-150382400 Weak transcription Fetal Kidney kidney
14 chr1:150362400-150382400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:150362400-150389600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:150362600-150416600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:150363000-150383400 Weak transcription Right Atrium heart
18 chr1:150370000-150407800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:150372200-150393200 Weak transcription Stomach Smooth Muscle stomach
20 chr1:150373000-150382200 Weak transcription Gastric stomach
21 chr1:150373000-150382200 Weak transcription Right Ventricle heart
22 chr1:150373000-150382400 Weak transcription Primary B cells from peripheral blood blood
23 chr1:150373200-150382400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:150373200-150382400 Weak transcription GM12878-XiMat blood
25 chr1:150373200-150389400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:150373200-150389800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:150373200-150390800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:150373200-150390800 Weak transcription Fetal Lung lung
29 chr1:150373200-150390800 Weak transcription Fetal Muscle Leg muscle
30 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:150373400-150390600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:150373400-150390600 Weak transcription Fetal Stomach stomach
33 chr1:150373800-150389400 Weak transcription Fetal Thymus thymus
34 chr1:150376200-150389800 Weak transcription Primary T cells from cord blood blood
35 chr1:150377000-150382200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:150377000-150382200 Weak transcription Pancreas Pancrea
37 chr1:150378400-150383000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:150378600-150382600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:150378800-150386800 Weak transcription Fetal Heart heart
40 chr1:150378800-150395200 Weak transcription Hela-S3 cervix
41 chr1:150379000-150382200 Weak transcription Brain Angular Gyrus brain
42 chr1:150379000-150382600 Weak transcription K562 blood
43 chr1:150379000-150383200 Weak transcription Psoas Muscle Psoas
44 chr1:150379000-150390600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:150379200-150382200 Weak transcription Left Ventricle heart
46 chr1:150379200-150382400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:150379200-150386600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:150379200-150386600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:150379200-150391200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:150379400-150387800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015