The 2.0 version of rSNPBase

Variant report

Variant rs1260400
Chromosome Location chr1:150296298-150296299
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150294600-150299200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:150294600-150301200 Weak transcription Pancreas Pancrea
3 chr1:150294800-150296800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:150294800-150297400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:150294800-150297400 Weak transcription Left Ventricle heart
6 chr1:150294800-150299200 Weak transcription Aorta Aorta
7 chr1:150294800-150305400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:150295000-150296400 Enhancers Primary T cells fromperipheralblood blood
9 chr1:150295000-150296600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:150295000-150297000 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr1:150295000-150297000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr1:150295000-150297200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:150295000-150297400 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:150295000-150297400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:150295000-150297400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:150295000-150297400 Weak transcription Colonic Mucosa Colon
17 chr1:150295000-150297400 Weak transcription Fetal Muscle Leg muscle
18 chr1:150295000-150297400 Weak transcription Lung lung
19 chr1:150295000-150297400 Weak transcription Ovary ovary
20 chr1:150295000-150297400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:150295000-150297400 Weak transcription Rectal Smooth Muscle rectum
22 chr1:150295000-150297400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:150295000-150297400 Weak transcription Spleen Spleen
24 chr1:150295000-150297400 Weak transcription HSMMtube muscle
25 chr1:150295000-150298000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:150295000-150298000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr1:150295000-150298200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:150295000-150299200 Weak transcription Gastric stomach
29 chr1:150295000-150300400 Weak transcription Esophagus oesophagus
30 chr1:150295000-150304800 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr1:150295000-150304800 Weak transcription Fetal Heart heart
32 chr1:150295200-150296600 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:150295200-150296600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:150295200-150296600 Weak transcription Brain Angular Gyrus brain
35 chr1:150295200-150296600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:150295200-150296800 Weak transcription Primary T cells from cord blood blood
37 chr1:150295200-150296800 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:150295200-150296800 Enhancers Brain Germinal Matrix brain
39 chr1:150295200-150297000 Weak transcription NHEK skin
40 chr1:150295200-150297200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr1:150295200-150297200 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr1:150295200-150297200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr1:150295200-150297200 Weak transcription NHDF-Ad bronchial
44 chr1:150295200-150297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:150295200-150297400 Weak transcription Brain Anterior Caudate brain
46 chr1:150295200-150297400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:150295200-150297400 Weak transcription Fetal Brain Female brain
48 chr1:150295200-150297400 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr1:150295200-150297400 Weak transcription Osteobl bone
50 chr1:150295200-150297800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015