Variant report

Variant rs12609033
Chromosome Location chr19:57061140-57061141
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:57047400-57077800 ZNF genes & repeats Liver Liver
2 chr19:57050600-57062800 ZNF genes & repeats A549 lung
3 chr19:57050800-57063000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
4 chr19:57050800-57067000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:57051200-57062600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
6 chr19:57051200-57068000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
7 chr19:57051400-57063000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:57051400-57068000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
9 chr19:57051400-57068000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr19:57051400-57068000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:57051400-57068000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
12 chr19:57051400-57070600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr19:57051600-57061200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr19:57051600-57067200 ZNF genes & repeats Primary hematopoietic stem cells blood
15 chr19:57051600-57078000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
16 chr19:57051800-57066600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
17 chr19:57051800-57067000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr19:57052200-57063000 ZNF genes & repeats Fetal Brain Female brain
19 chr19:57052200-57070200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
20 chr19:57052400-57062600 ZNF genes & repeats Ovary ovary
21 chr19:57052400-57068000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr19:57052600-57062800 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
23 chr19:57052600-57063000 ZNF genes & repeats Fetal Muscle Leg muscle
24 chr19:57052600-57067800 ZNF genes & repeats Dnd41 blood
25 chr19:57053800-57063000 ZNF genes & repeats Fetal Lung lung
26 chr19:57054000-57068000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr19:57054800-57062400 ZNF genes & repeats Aorta Aorta
28 chr19:57054800-57077800 ZNF genes & repeats Adipose Nuclei Adipose
29 chr19:57055000-57067200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
30 chr19:57055000-57070800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr19:57055200-57063000 ZNF genes & repeats Brain Hippocampus Middle brain
32 chr19:57055200-57063000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
33 chr19:57055200-57068000 ZNF genes & repeats Duodenum Mucosa Duodenum
34 chr19:57056200-57063000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr19:57056200-57068000 ZNF genes & repeats Brain Substantia Nigra brain
36 chr19:57057000-57062600 ZNF genes & repeats HSMM muscle
37 chr19:57057000-57063200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
38 chr19:57058000-57062800 ZNF genes & repeats HSMMtube muscle
39 chr19:57058000-57063000 ZNF genes & repeats Primary T cells from cord blood blood
40 chr19:57058200-57068200 ZNF genes & repeats Colon Smooth Muscle Colon
41 chr19:57058400-57062800 ZNF genes & repeats Brain Anterior Caudate brain
42 chr19:57058400-57062800 ZNF genes & repeats Colonic Mucosa Colon
43 chr19:57058400-57062800 ZNF genes & repeats Rectal Smooth Muscle rectum
44 chr19:57058400-57067200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
45 chr19:57058600-57061200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr19:57058600-57062600 ZNF genes & repeats NH-A brain
47 chr19:57058600-57066400 ZNF genes & repeats Primary B cells from peripheral blood blood
48 chr19:57058600-57068000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr19:57058800-57061600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr19:57058800-57063000 ZNF genes & repeats Rectal Mucosa Donor 31 rectum

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