Variant report

Variant	rs12614173
Chromosome Location	chr2:180487582-180487583
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10196048	1.00[JPT][hapmap]
rs10497543	1.00[JPT][hapmap]
rs11904349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1515268	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1515307	0.84[CEU][hapmap]
rs1877943	0.86[CEU][hapmap]
rs2138193	0.84[CEU][hapmap];0.83[EUR][1000 genomes]
rs7558351	0.86[CEU][hapmap]
rs7570466	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7608208	0.88[CEU][hapmap];0.81[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180477400-180488200	Weak transcription	Pancreas	Pancrea
2	chr2:180478800-180488200	Weak transcription	Lung	lung
3	chr2:180486000-180494600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr2:180486400-180487800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:180486400-180487800	Enhancers	HSMMtube	muscle
6	chr2:180486400-180489800	Enhancers	Fetal Heart	heart
7	chr2:180487000-180487600	Enhancers	HSMM	muscle
8	chr2:180487000-180487800	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr2:180487200-180487600	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr2:180487200-180487600	Enhancers	Osteobl	bone
11	chr2:180487400-180489600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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