Variant report

Variant	rs7608208
Chromosome Location	chr2:180481889-180481890
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11681178	1.00[CHB][hapmap]
rs11683314	1.00[CHB][hapmap]
rs11688721	1.00[CHB][hapmap]
rs11689513	1.00[CHB][hapmap]
rs11901866	1.00[CHB][hapmap]
rs11904349	0.88[CEU][hapmap];0.80[TSI][hapmap];0.81[EUR][1000 genomes]
rs12614173	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs13000183	1.00[CHB][hapmap]
rs13012626	1.00[CHB][hapmap]
rs13014208	1.00[CHB][hapmap]
rs13018742	1.00[CHB][hapmap]
rs1356062	1.00[CHB][hapmap]
rs1356063	1.00[CHB][hapmap]
rs1515268	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1515307	0.87[CEU][hapmap];0.87[GIH][hapmap];0.82[TSI][hapmap]
rs1554101	0.88[CEU][hapmap]
rs16866863	0.93[YRI][hapmap]
rs17767480	1.00[CHB][hapmap]
rs17767681	1.00[CHB][hapmap]
rs17768733	1.00[CHB][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes]
rs17768920	1.00[CHB][hapmap]
rs17818499	1.00[CHB][hapmap]
rs17818703	1.00[CHB][hapmap]
rs17819812	1.00[ASW][hapmap];1.00[CHB][hapmap];0.87[MEX][hapmap];0.93[MKK][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes]
rs17820073	1.00[CHB][hapmap]
rs1877942	1.00[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs2138193	0.96[CEU][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3106716	0.81[CEU][hapmap]
rs4893877	1.00[CHB][hapmap]
rs4894111	1.00[CHB][hapmap]
rs4894114	0.91[ASW][hapmap];1.00[CHB][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.93[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs4894115	0.88[CEU][hapmap]
rs7570466	0.83[EUR][1000 genomes]
rs951424	1.00[CHB][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes]
rs951425	0.88[CEU][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180477400-180488200	Weak transcription	Pancreas	Pancrea
2	chr2:180477800-180484200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:180478000-180483000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr2:180478800-180488200	Weak transcription	Lung	lung
5	chr2:180479000-180487400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr2:180479600-180483400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr2:180479600-180483600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr2:180480000-180483400	Weak transcription	NHEK	skin

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