The 2.0 version of rSNPBase

Variant report

Variant rs12623372
Chromosome Location chr2:10071436-10071437
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9993800-10079600 Weak transcription Gastric stomach
2 chr2:10017800-10073000 Weak transcription Right Ventricle heart
3 chr2:10026000-10072800 Weak transcription Stomach Smooth Muscle stomach
4 chr2:10030400-10077200 Weak transcription Aorta Aorta
5 chr2:10030600-10080600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:10036600-10076200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr2:10036800-10073000 Weak transcription H1 Cell Line embryonic stem cell
8 chr2:10037200-10080400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:10037800-10075600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:10038600-10079800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr2:10038600-10081400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:10042600-10077000 Weak transcription Colon Smooth Muscle Colon
13 chr2:10045800-10079600 Weak transcription Esophagus oesophagus
14 chr2:10046000-10075200 Weak transcription Brain Hippocampus Middle brain
15 chr2:10047200-10080000 Weak transcription Colonic Mucosa Colon
16 chr2:10049000-10077400 Weak transcription Brain Anterior Caudate brain
17 chr2:10049400-10077200 Weak transcription Brain Angular Gyrus brain
18 chr2:10049400-10081000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr2:10049600-10081200 Weak transcription H9 Cell Line embryonic stem cell
20 chr2:10052800-10076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr2:10053200-10077800 Weak transcription Liver Liver
22 chr2:10054600-10073400 Weak transcription Brain Substantia Nigra brain
23 chr2:10054800-10072200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:10054800-10079000 Weak transcription Fetal Kidney kidney
25 chr2:10055000-10072600 Weak transcription Spleen Spleen
26 chr2:10055000-10080800 Weak transcription Pancreas Pancrea
27 chr2:10055000-10080800 Weak transcription Placenta Amnion Placenta Amnion
28 chr2:10055000-10081800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr2:10055200-10072600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:10055200-10072800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr2:10055200-10073200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr2:10055200-10079600 Weak transcription K562 blood
33 chr2:10055200-10080800 Weak transcription HMEC breast
34 chr2:10055600-10073000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:10055800-10075800 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:10056800-10074200 Weak transcription Primary hematopoietic stem cells blood
37 chr2:10058800-10076000 Weak transcription Rectal Smooth Muscle rectum
38 chr2:10059000-10080600 Weak transcription HSMMtube muscle
39 chr2:10059200-10072800 Weak transcription Left Ventricle heart
40 chr2:10059400-10081200 Weak transcription GM12878-XiMat blood
41 chr2:10059600-10072600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr2:10060000-10073400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr2:10060400-10073000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr2:10060400-10075800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr2:10060600-10072800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr2:10060600-10072800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:10060600-10073200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr2:10060600-10073200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr2:10060600-10073400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr2:10060600-10073400 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015