The 2.0 version of rSNPBase

Variant report

Variant rs4669477
Chromosome Location chr2:10019948-10019949
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9987200-10038400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:9993800-10079600 Weak transcription Gastric stomach
3 chr2:9995800-10038000 Weak transcription Small Intestine intestine
4 chr2:9998200-10024000 Weak transcription Rectal Smooth Muscle rectum
5 chr2:9998200-10035600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr2:9998600-10024000 Weak transcription Pancreas Pancrea
7 chr2:9998800-10026000 Weak transcription Fetal Brain Male brain
8 chr2:9998800-10032200 Weak transcription Fetal Heart heart
9 chr2:9998800-10036400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:9999000-10024000 Weak transcription Colonic Mucosa Colon
11 chr2:9999000-10024000 Weak transcription Spleen Spleen
12 chr2:9999000-10035800 Weak transcription Brain Hippocampus Middle brain
13 chr2:9999000-10035800 Weak transcription Brain Substantia Nigra brain
14 chr2:9999000-10037000 Weak transcription Brain Cingulate Gyrus brain
15 chr2:9999000-10037200 Weak transcription Colon Smooth Muscle Colon
16 chr2:9999200-10036200 Weak transcription Brain Angular Gyrus brain
17 chr2:9999200-10036400 Weak transcription Placenta Amnion Placenta Amnion
18 chr2:9999200-10053800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr2:10001600-10024000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:10001600-10024000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr2:10002200-10024200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:10007400-10020000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:10007400-10020400 Strong transcription Primary T cells from cord blood blood
24 chr2:10007800-10021000 Strong transcription A549 lung
25 chr2:10007800-10026200 Strong transcription Dnd41 blood
26 chr2:10008000-10026800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:10008200-10020200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:10008200-10028000 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr2:10008400-10026600 Weak transcription GM12878-XiMat blood
30 chr2:10008600-10020800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:10008600-10021000 Strong transcription Primary monocytes fromperipheralblood blood
32 chr2:10008800-10021000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:10009000-10024000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:10009600-10020800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:10010200-10021000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr2:10010200-10021200 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr2:10010400-10020200 Strong transcription Fetal Intestine Large intestine
38 chr2:10010800-10021000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr2:10011600-10020200 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:10011600-10020400 Strong transcription NH-A brain
41 chr2:10011600-10022200 Strong transcription Fetal Thymus thymus
42 chr2:10011800-10020800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr2:10012000-10020400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr2:10012000-10021400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:10012200-10020000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:10013000-10020200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr2:10013000-10020800 Strong transcription Primary B cells from cord blood blood
48 chr2:10013200-10020800 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr2:10013600-10020800 Strong transcription Primary T cells fromperipheralblood blood
50 chr2:10013800-10020200 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015