The 2.0 version of rSNPBase

Variant report

Variant rs7563385
Chromosome Location chr2:10002741-10002742
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9987200-10038400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:9987400-10003200 Weak transcription Stomach Mucosa stomach
3 chr2:9993000-10003600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:9993600-10007400 Weak transcription Psoas Muscle Psoas
5 chr2:9993800-10002800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:9993800-10079600 Weak transcription Gastric stomach
7 chr2:9995400-10002800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
8 chr2:9995800-10038000 Weak transcription Small Intestine intestine
9 chr2:9996400-10016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:9997800-10002800 ZNF genes & repeats Fetal Muscle Leg muscle
11 chr2:9998200-10013800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr2:9998200-10024000 Weak transcription Rectal Smooth Muscle rectum
13 chr2:9998200-10035600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr2:9998400-10007400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr2:9998600-10017000 Weak transcription K562 blood
16 chr2:9998600-10024000 Weak transcription Pancreas Pancrea
17 chr2:9998800-10010400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:9998800-10010400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr2:9998800-10026000 Weak transcription Fetal Brain Male brain
20 chr2:9998800-10032200 Weak transcription Fetal Heart heart
21 chr2:9998800-10036400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:9999000-10008600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr2:9999000-10010400 Weak transcription Duodenum Mucosa Duodenum
24 chr2:9999000-10014200 Weak transcription Aorta Aorta
25 chr2:9999000-10014800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:9999000-10015200 Weak transcription Esophagus oesophagus
27 chr2:9999000-10015400 Weak transcription HUVEC blood vessel
28 chr2:9999000-10017600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr2:9999000-10024000 Weak transcription Colonic Mucosa Colon
30 chr2:9999000-10024000 Weak transcription Spleen Spleen
31 chr2:9999000-10035800 Weak transcription Brain Hippocampus Middle brain
32 chr2:9999000-10035800 Weak transcription Brain Substantia Nigra brain
33 chr2:9999000-10037000 Weak transcription Brain Cingulate Gyrus brain
34 chr2:9999000-10037200 Weak transcription Colon Smooth Muscle Colon
35 chr2:9999200-10007400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr2:9999200-10007800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr2:9999200-10008000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr2:9999200-10013800 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr2:9999200-10013800 Weak transcription Left Ventricle heart
40 chr2:9999200-10017000 Weak transcription HSMMtube muscle
41 chr2:9999200-10017600 Weak transcription Brain Anterior Caudate brain
42 chr2:9999200-10036200 Weak transcription Brain Angular Gyrus brain
43 chr2:9999200-10036400 Weak transcription Placenta Amnion Placenta Amnion
44 chr2:9999200-10053800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:9999400-10008600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:10000400-10007400 Weak transcription Primary T cells from cord blood blood
47 chr2:10000600-10002800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
48 chr2:10000600-10010400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr2:10000600-10012600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr2:10000800-10010600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015