The 2.0 version of rSNPBase

Variant report

Variant rs2280151
Chromosome Location chr2:10036560-10036561
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9987200-10038400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:9993800-10079600 Weak transcription Gastric stomach
3 chr2:9995800-10038000 Weak transcription Small Intestine intestine
4 chr2:9999000-10037000 Weak transcription Brain Cingulate Gyrus brain
5 chr2:9999000-10037200 Weak transcription Colon Smooth Muscle Colon
6 chr2:9999200-10053800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr2:10014800-10045400 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr2:10017800-10073000 Weak transcription Right Ventricle heart
9 chr2:10019800-10037200 Weak transcription HUVEC blood vessel
10 chr2:10020400-10037400 Weak transcription K562 blood
11 chr2:10024400-10037600 Weak transcription Psoas Muscle Psoas
12 chr2:10024400-10053800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr2:10024600-10037600 Weak transcription Pancreas Pancrea
14 chr2:10024800-10047600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr2:10024800-10051400 Weak transcription Duodenum Mucosa Duodenum
16 chr2:10025000-10047000 Weak transcription Thymus Thymus
17 chr2:10025000-10053800 Weak transcription Fetal Muscle Trunk muscle
18 chr2:10025000-10053800 Weak transcription Ovary ovary
19 chr2:10025000-10054400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:10025000-10054400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:10025000-10054400 Weak transcription Spleen Spleen
22 chr2:10025400-10052600 Weak transcription Left Ventricle heart
23 chr2:10025800-10036600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:10026000-10072800 Weak transcription Stomach Smooth Muscle stomach
25 chr2:10027000-10040400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:10027000-10047000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:10027400-10052200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:10027400-10053400 Weak transcription Fetal Brain Male brain
29 chr2:10027600-10036600 Weak transcription NHDF-Ad bronchial
30 chr2:10027600-10052000 Weak transcription Primary B cells from peripheral blood blood
31 chr2:10028000-10036800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr2:10028200-10036800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr2:10028200-10037600 Weak transcription Fetal Lung lung
34 chr2:10028200-10051000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr2:10028200-10053800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:10030400-10036600 Weak transcription HSMMtube muscle
37 chr2:10030400-10037600 Weak transcription Fetal Muscle Leg muscle
38 chr2:10030400-10077200 Weak transcription Aorta Aorta
39 chr2:10030600-10037200 Weak transcription GM12878-XiMat blood
40 chr2:10030600-10080600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:10032600-10044600 Weak transcription Primary T cells fromperipheralblood blood
42 chr2:10032800-10037000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr2:10032800-10044400 Weak transcription Dnd41 blood
44 chr2:10033000-10038200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr2:10033000-10044000 Weak transcription Primary hematopoietic stem cells blood
46 chr2:10033000-10044400 Weak transcription Primary B cells from cord blood blood
47 chr2:10033000-10052800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:10033600-10041600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr2:10034600-10037000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr2:10034600-10037200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015