The 2.0 version of rSNPBase

Variant report

Variant rs12630292
Chromosome Location chr3:150428201-150428202
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:150422000-150430400 Weak transcription Spleen Spleen
2 chr3:150422200-150429800 Weak transcription Pancreas Pancrea
3 chr3:150422200-150439400 Weak transcription Ovary ovary
4 chr3:150422200-150443200 Weak transcription Lung lung
5 chr3:150422400-150428600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr3:150422400-150429800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:150422400-150430000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:150422400-150434800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr3:150422400-150443000 Weak transcription Placenta Amnion Placenta Amnion
10 chr3:150422600-150428600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:150422600-150429800 Weak transcription Placenta Placenta
12 chr3:150422600-150429800 Weak transcription Thymus Thymus
13 chr3:150422600-150431000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:150422600-150439200 Weak transcription Primary B cells from peripheral blood blood
15 chr3:150422600-150439200 Weak transcription Fetal Intestine Small intestine
16 chr3:150422600-150439400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:150422600-150439400 Weak transcription Adipose Nuclei Adipose
18 chr3:150422600-150441800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr3:150423200-150430000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr3:150423200-150451600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr3:150423400-150428400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr3:150423400-150429800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr3:150423400-150430000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr3:150423600-150439400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr3:150423800-150439400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr3:150425200-150429000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:150425200-150429200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr3:150425200-150430000 Strong transcription Primary T cells from cord blood blood
29 chr3:150426000-150429000 Weak transcription A549 lung
30 chr3:150426000-150429400 Strong transcription Fetal Thymus thymus
31 chr3:150426000-150430400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:150426600-150429200 Strong transcription Primary T cells fromperipheralblood blood
33 chr3:150426800-150428800 Weak transcription Gastric stomach
34 chr3:150426800-150429800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:150427000-150429000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr3:150427000-150429200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:150427000-150430000 Strong transcription Fetal Lung lung
38 chr3:150427600-150428600 Strong transcription Primary T killer naive cells fromperipheralblood blood
39 chr3:150427600-150428800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:150427600-150429200 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr3:150427600-150429200 Strong transcription Fetal Stomach stomach
42 chr3:150427600-150430000 Strong transcription Primary B cells from cord blood blood
43 chr3:150427800-150428400 Strong transcription Left Ventricle heart
44 chr3:150427800-150432400 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr3:150428000-150428400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:150428000-150428400 ZNF genes & repeats Primary hematopoietic stem cells blood
47 chr3:150428000-150428600 ZNF genes & repeats Fetal Kidney kidney
48 chr3:150428000-150429800 Strong transcription Fetal Muscle Leg muscle
49 chr3:150428000-150430000 Strong transcription Fetal Muscle Trunk muscle
50 chr3:150428200-150428400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015