The 2.0 version of rSNPBase

Variant report

Variant rs4558804
Chromosome Location chr3:150429417-150429418
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:150422000-150430400 Weak transcription Spleen Spleen
2 chr3:150422200-150429800 Weak transcription Pancreas Pancrea
3 chr3:150422200-150439400 Weak transcription Ovary ovary
4 chr3:150422200-150443200 Weak transcription Lung lung
5 chr3:150422400-150429800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:150422400-150430000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:150422400-150434800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr3:150422400-150443000 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:150422600-150429800 Weak transcription Placenta Placenta
10 chr3:150422600-150429800 Weak transcription Thymus Thymus
11 chr3:150422600-150431000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr3:150422600-150439200 Weak transcription Primary B cells from peripheral blood blood
13 chr3:150422600-150439200 Weak transcription Fetal Intestine Small intestine
14 chr3:150422600-150439400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:150422600-150439400 Weak transcription Adipose Nuclei Adipose
16 chr3:150422600-150441800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:150423200-150430000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr3:150423200-150451600 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr3:150423400-150429800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr3:150423400-150430000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr3:150423600-150439400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr3:150423800-150439400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr3:150425200-150430000 Strong transcription Primary T cells from cord blood blood
24 chr3:150426000-150430400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr3:150426800-150429800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr3:150427000-150430000 Strong transcription Fetal Lung lung
27 chr3:150427600-150430000 Strong transcription Primary B cells from cord blood blood
28 chr3:150427800-150432400 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr3:150428000-150429800 Strong transcription Fetal Muscle Leg muscle
30 chr3:150428000-150430000 Strong transcription Fetal Muscle Trunk muscle
31 chr3:150428200-150430200 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr3:150428400-150429600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr3:150428400-150429800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:150428400-150430200 Weak transcription Aorta Aorta
35 chr3:150428400-150439600 Weak transcription Left Ventricle heart
36 chr3:150428600-150431000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr3:150428600-150439200 Weak transcription Fetal Kidney kidney
38 chr3:150428800-150430000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr3:150428800-150431600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr3:150428800-150439000 Weak transcription Brain Anterior Caudate brain
41 chr3:150428800-150439200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:150429000-150430800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr3:150429000-150431400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr3:150429000-150439400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr3:150429200-150430200 ZNF genes & repeats Fetal Stomach stomach
46 chr3:150429200-150439400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:150429200-150439400 Weak transcription Primary T cells fromperipheralblood blood
48 chr3:150429200-150439400 Weak transcription Primary hematopoietic stem cells blood
49 chr3:150429200-150444600 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr3:150429200-150457600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015