The 2.0 version of rSNPBase

Variant report

Variant rs1897491
Chromosome Location chr3:150425702-150425703
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:150422000-150430400 Weak transcription Spleen Spleen
2 chr3:150422200-150428000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr3:150422200-150428200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:150422200-150429800 Weak transcription Pancreas Pancrea
5 chr3:150422200-150439400 Weak transcription Ovary ovary
6 chr3:150422200-150443200 Weak transcription Lung lung
7 chr3:150422400-150426200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr3:150422400-150427000 Weak transcription Fetal Intestine Large intestine
9 chr3:150422400-150427200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr3:150422400-150428200 Weak transcription Brain Anterior Caudate brain
11 chr3:150422400-150428600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:150422400-150429800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:150422400-150430000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr3:150422400-150434800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr3:150422400-150443000 Weak transcription Placenta Amnion Placenta Amnion
16 chr3:150422600-150426000 Weak transcription Fetal Muscle Leg muscle
17 chr3:150422600-150426000 Weak transcription Fetal Thymus thymus
18 chr3:150422600-150426800 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr3:150422600-150427600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr3:150422600-150427600 Weak transcription Fetal Stomach stomach
21 chr3:150422600-150427800 Weak transcription Left Ventricle heart
22 chr3:150422600-150428000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:150422600-150428200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr3:150422600-150428200 Weak transcription Aorta Aorta
25 chr3:150422600-150428200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr3:150422600-150428200 Weak transcription Osteobl bone
27 chr3:150422600-150428600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:150422600-150429800 Weak transcription Placenta Placenta
29 chr3:150422600-150429800 Weak transcription Thymus Thymus
30 chr3:150422600-150431000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr3:150422600-150439200 Weak transcription Primary B cells from peripheral blood blood
32 chr3:150422600-150439200 Weak transcription Fetal Intestine Small intestine
33 chr3:150422600-150439400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr3:150422600-150439400 Weak transcription Adipose Nuclei Adipose
35 chr3:150422600-150441800 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr3:150423200-150425800 Weak transcription Fetal Muscle Trunk muscle
37 chr3:150423200-150428200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr3:150423200-150430000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr3:150423200-150451600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr3:150423400-150427000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr3:150423400-150427200 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr3:150423400-150428400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr3:150423400-150429800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr3:150423400-150430000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr3:150423600-150439400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr3:150423800-150427000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:150423800-150427600 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr3:150423800-150439400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr3:150425000-150426000 Strong transcription Fetal Lung lung
50 chr3:150425200-150429000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015