The 2.0 version of rSNPBase

Variant report

Variant rs12630796
Chromosome Location chr3:101230934-101230935
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101198600-101231000 Weak transcription GM12878-XiMat blood
2 chr3:101204000-101231200 Weak transcription Esophagus oesophagus
3 chr3:101207800-101231000 Weak transcription Aorta Aorta
4 chr3:101210000-101231200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:101211200-101231000 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr3:101211800-101231400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:101212200-101231000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr3:101212200-101231000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr3:101212200-101231000 Weak transcription Spleen Spleen
10 chr3:101216600-101231000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:101217800-101231000 Weak transcription Ovary ovary
12 chr3:101218400-101231000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:101219600-101231000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr3:101223800-101231000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr3:101224000-101231000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr3:101227000-101231000 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr3:101227600-101231000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr3:101227600-101231000 Enhancers Primary T helper cells PMA-I stimulated --
19 chr3:101228000-101231000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr3:101228000-101231000 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr3:101228000-101231000 Weak transcription Stomach Mucosa stomach
22 chr3:101228200-101231000 Weak transcription Placenta Amnion Placenta Amnion
23 chr3:101228400-101231000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr3:101229200-101231000 Weak transcription NHDF-Ad bronchial
25 chr3:101229400-101231000 Enhancers Primary T cells fromperipheralblood blood
26 chr3:101229400-101231000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:101229800-101231000 Enhancers Primary B cells from cord blood blood
28 chr3:101229800-101231000 Weak transcription Fetal Thymus thymus
29 chr3:101230000-101231000 Enhancers Primary hematopoietic stem cells blood
30 chr3:101230000-101231000 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr3:101230000-101231600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:101230000-101232400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:101230200-101231000 Enhancers Primary B cells from peripheral blood blood
34 chr3:101230200-101231000 Enhancers Adipose Nuclei Adipose
35 chr3:101230200-101231000 Weak transcription Colon Smooth Muscle Colon
36 chr3:101230200-101231000 Enhancers Thymus Thymus
37 chr3:101230200-101231000 Enhancers HUVEC blood vessel
38 chr3:101230200-101231200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
39 chr3:101230200-101231200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
40 chr3:101230200-101232400 Active TSS HMEC breast
41 chr3:101230200-101232800 Active TSS Rectal Smooth Muscle rectum
42 chr3:101230200-101233000 Active TSS Rectal Mucosa Donor 29 rectum
43 chr3:101230400-101231000 Enhancers Primary monocytes fromperipheralblood blood
44 chr3:101230400-101231000 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr3:101230400-101231000 Enhancers Liver Liver
46 chr3:101230400-101231000 Weak transcription Brain Cingulate Gyrus brain
47 chr3:101230400-101231000 Active TSS Brain Substantia Nigra brain
48 chr3:101230400-101231000 Weak transcription Fetal Heart heart
49 chr3:101230400-101231000 Weak transcription NH-A brain
50 chr3:101230400-101231200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015