The 2.0 version of rSNPBase

Variant report

Variant rs9857389
Chromosome Location chr3:101108972-101108973
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101045800-101110800 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:101085600-101137600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:101096800-101111600 Weak transcription Duodenum Mucosa Duodenum
4 chr3:101099000-101110400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr3:101099000-101114600 Weak transcription K562 blood
6 chr3:101106000-101111200 Weak transcription Rectal Smooth Muscle rectum
7 chr3:101106000-101111400 Weak transcription Stomach Smooth Muscle stomach
8 chr3:101106600-101114600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr3:101106800-101109200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr3:101106800-101109600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr3:101106800-101109800 ZNF genes & repeats GM12878-XiMat blood
12 chr3:101106800-101112200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:101106800-101133000 Weak transcription Left Ventricle heart
14 chr3:101106800-101133000 Weak transcription Pancreas Pancrea
15 chr3:101106800-101133000 Weak transcription Spleen Spleen
16 chr3:101107000-101109000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr3:101107000-101114000 Weak transcription Fetal Thymus thymus
18 chr3:101107000-101118600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr3:101107000-101140800 Weak transcription Esophagus oesophagus
20 chr3:101107200-101109400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr3:101107200-101111600 Weak transcription Lung lung
22 chr3:101107200-101133000 Weak transcription Gastric stomach
23 chr3:101107200-101133000 Weak transcription Thymus Thymus
24 chr3:101107200-101161200 Weak transcription Aorta Aorta
25 chr3:101108000-101109600 ZNF genes & repeats Dnd41 blood
26 chr3:101108200-101112600 Weak transcription Ovary ovary
27 chr3:101108400-101111400 Weak transcription Fetal Kidney kidney
28 chr3:101108600-101111400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr3:101108600-101111400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr3:101108600-101112600 Weak transcription Primary T cells fromperipheralblood blood
31 chr3:101108600-101113600 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr3:101108600-101114600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr3:101108600-101114600 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr3:101108600-101116400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr3:101108600-101119400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:101108600-101138000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:101108800-101109000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
38 chr3:101108800-101110200 Weak transcription Primary T cells from cord blood blood
39 chr3:101108800-101111400 Weak transcription Primary B cells from peripheral blood blood
40 chr3:101108800-101113000 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015