The 2.0 version of rSNPBase

Variant report

Variant rs2553415
Chromosome Location chr3:101095630-101095631
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101030800-101096400 Weak transcription Rectal Smooth Muscle rectum
2 chr3:101038600-101101800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr3:101039800-101106600 Weak transcription Thymus Thymus
4 chr3:101043200-101105000 Weak transcription Brain Anterior Caudate brain
5 chr3:101043800-101096600 Weak transcription Brain Substantia Nigra brain
6 chr3:101044400-101103000 Weak transcription Gastric stomach
7 chr3:101045800-101110800 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:101047400-101096000 Weak transcription Psoas Muscle Psoas
9 chr3:101049200-101096000 Weak transcription Ovary ovary
10 chr3:101049200-101102200 Weak transcription Right Ventricle heart
11 chr3:101066200-101096000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:101076200-101102000 Weak transcription Lung lung
13 chr3:101076200-101105600 Weak transcription Esophagus oesophagus
14 chr3:101076600-101096400 Weak transcription Brain Hippocampus Middle brain
15 chr3:101077000-101095800 Weak transcription Colon Smooth Muscle Colon
16 chr3:101077000-101096000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr3:101077000-101102200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:101077800-101096000 Weak transcription Small Intestine intestine
19 chr3:101077800-101101000 Weak transcription NHDF-Ad bronchial
20 chr3:101077800-101102000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:101079200-101096000 Weak transcription HSMMtube muscle
22 chr3:101080400-101098800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr3:101083200-101102000 Weak transcription Left Ventricle heart
24 chr3:101083400-101101800 Weak transcription Stomach Smooth Muscle stomach
25 chr3:101083400-101105200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr3:101083600-101096400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr3:101083600-101098200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr3:101083800-101096000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr3:101084400-101102000 Weak transcription Fetal Stomach stomach
30 chr3:101084600-101106600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:101084800-101102000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr3:101085000-101106600 Weak transcription Fetal Brain Female brain
33 chr3:101085400-101096200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:101085400-101098200 Weak transcription Primary hematopoietic stem cells blood
35 chr3:101085600-101096000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr3:101085600-101096800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr3:101085600-101098600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr3:101085600-101098600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr3:101085600-101098800 Weak transcription K562 blood
40 chr3:101085600-101106800 Weak transcription Dnd41 blood
41 chr3:101085600-101137600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:101087800-101096400 Weak transcription Colonic Mucosa Colon
43 chr3:101089200-101098600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr3:101089600-101103800 Weak transcription HSMM muscle
45 chr3:101089800-101101000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr3:101090000-101096200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr3:101090200-101098200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr3:101090200-101098400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr3:101090200-101103200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:101090200-101103400 Weak transcription Pancreas Pancrea

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015