Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:97090606..97093234-chr4:97096848..97099825,3	K562	blood:
2	chr4:97090980..97093234-chr4:97096848..97099424,2	K562	blood:
3	chr4:97091475..97092009-chr4:98641981..98642501,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10004804	0.86[ASN][1000 genomes]
rs10016180	0.86[JPT][hapmap]
rs10856919	0.86[ASN][1000 genomes]
rs11932384	0.80[ASN][1000 genomes]
rs12499067	0.82[ASN][1000 genomes]
rs12644982	0.80[ASN][1000 genomes]
rs1847969	0.89[JPT][hapmap]
rs2113973	0.80[ASN][1000 genomes]
rs4293790	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs4699483	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4699485	0.82[ASN][1000 genomes]
rs55847611	0.83[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6532596	0.82[ASN][1000 genomes]
rs6532597	0.82[ASN][1000 genomes]
rs6826156	0.82[ASN][1000 genomes]
rs6834542	0.81[ASN][1000 genomes]
rs72880179	0.88[ASN][1000 genomes]
rs72880182	0.80[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7665151	0.92[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7671563	0.92[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7676317	0.82[ASN][1000 genomes]
rs7676764	0.82[ASN][1000 genomes]
rs9884259	0.85[JPT][hapmap]
rs9999006	0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830013	chr4:97033125-97204291	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1003868	chr4:97068155-97222544	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97091600-97092000	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr4:97091600-97092400	Active TSS	Placenta	Placenta
3	chr4:97091600-97093000	Active TSS	K562	blood

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