Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10939327	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs11736953	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12506199	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12641003	0.80[ASN][1000 genomes]
rs13130452	1.00[YRI][hapmap]
rs13139117	1.00[YRI][hapmap]
rs1499471	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2036244	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4348052	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs5014904	1.00[YRI][hapmap]
rs56854499	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60167602	0.86[EUR][1000 genomes]
rs66472059	0.92[EUR][1000 genomes]
rs66982156	0.83[ASN][1000 genomes]
rs67114056	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67840794	0.92[EUR][1000 genomes]
rs6837499	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs6852560	0.92[EUR][1000 genomes]
rs72619201	0.92[EUR][1000 genomes]
rs73113493	0.84[EUR][1000 genomes]
rs73113497	0.84[EUR][1000 genomes]
rs73115169	0.87[EUR][1000 genomes]
rs73115191	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73115201	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs73117110	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9684179	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:31058000-31077200	Weak transcription	Aorta	Aorta
2	chr4:31066400-31088600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:31067200-31070800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr4:31067800-31073400	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr4:31068800-31070200	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr4:31069200-31070200	Enhancers	Fetal Heart	heart

Quick Search: