Variant report
Variant | rs12675674 |
---|---|
Chromosome Location | chr8:59240115-59240116 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:59237498..59240129-chr8:59242647..59244398,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12679610 | 0.86[ASN][1000 genomes] |
rs12682314 | 1.00[EUR][1000 genomes] |
rs16923375 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs16923442 | 0.90[AMR][1000 genomes] |
rs16923455 | 0.90[AMR][1000 genomes] |
rs16923457 | 0.90[AMR][1000 genomes] |
rs16923502 | 0.90[AMR][1000 genomes] |
rs16923506 | 0.80[AMR][1000 genomes] |
rs16923510 | 0.80[AMR][1000 genomes] |
rs57465869 | 0.90[AMR][1000 genomes] |
rs57749758 | 0.90[AMR][1000 genomes] |
rs59152897 | 0.90[AMR][1000 genomes] |
rs59206925 | 0.80[AMR][1000 genomes] |
rs59858156 | 0.90[AMR][1000 genomes] |
rs62514332 | 0.95[ASN][1000 genomes] |
rs7016739 | 0.80[AMR][1000 genomes] |
rs73247423 | 1.00[EUR][1000 genomes] |
rs73247432 | 1.00[EUR][1000 genomes] |
rs7822723 | 0.90[AMR][1000 genomes] |
rs8192873 | 0.90[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2761427 | chr8:59204373-59242564 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:59229400-59241600 | Weak transcription | Right Atrium | heart |