Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10090263	0.80[EUR][1000 genomes]
rs11785847	0.86[ASN][1000 genomes]
rs12543857	0.81[ASN][1000 genomes]
rs12676528	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13248067	0.88[ASN][1000 genomes]
rs13254656	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13256714	0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13258879	0.88[ASN][1000 genomes]
rs13263055	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13263280	0.87[ASN][1000 genomes]
rs34163390	0.88[ASN][1000 genomes]
rs4131859	0.88[ASN][1000 genomes]
rs4266637	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4546648	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4629855	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4737466	0.85[ASN][1000 genomes]
rs4738611	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6471640	0.88[ASN][1000 genomes]
rs6471649	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9650186	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv890937	chr8:58600994-58695807	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58640000-58649400	Weak transcription	Aorta	Aorta

Quick Search: