The 2.0 version of rSNPBase

Variant report

Variant rs12693576
Chromosome Location chr2:191342715-191342716
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191306600-191351000 Weak transcription Pancreas Pancrea
2 chr2:191325600-191346200 Weak transcription Right Ventricle heart
3 chr2:191327600-191353000 Weak transcription Primary B cells from cord blood blood
4 chr2:191332800-191356200 Weak transcription Aorta Aorta
5 chr2:191332800-191364200 Weak transcription Spleen Spleen
6 chr2:191333400-191355400 Weak transcription Fetal Muscle Trunk muscle
7 chr2:191334200-191370200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:191334400-191351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:191334400-191352800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr2:191334400-191353400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr2:191334400-191355400 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr2:191334600-191348800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr2:191334800-191353200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr2:191334800-191394800 Weak transcription HSMMtube muscle
15 chr2:191335200-191342800 Weak transcription Primary monocytes fromperipheralblood blood
16 chr2:191335200-191353000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr2:191335200-191353600 Weak transcription GM12878-XiMat blood
18 chr2:191335400-191342800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr2:191335400-191346000 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr2:191335400-191353000 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr2:191335400-191366200 Weak transcription Hela-S3 cervix
22 chr2:191335600-191353000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr2:191336000-191354200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:191336200-191346200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr2:191336200-191346600 Weak transcription Primary hematopoietic stem cells blood
26 chr2:191336600-191346200 Weak transcription Fetal Thymus thymus
27 chr2:191336600-191346400 Weak transcription Thymus Thymus
28 chr2:191336600-191348600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr2:191336600-191348800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr2:191336600-191353000 Weak transcription Primary T cells fromperipheralblood blood
31 chr2:191336600-191353000 Weak transcription Dnd41 blood
32 chr2:191336600-191353200 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr2:191336600-191353600 Weak transcription Primary B cells from peripheral blood blood
34 chr2:191336800-191353000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:191342200-191343200 Enhancers Fetal Kidney kidney
36 chr2:191342400-191342800 Flanking Active TSS Brain Substantia Nigra brain
37 chr2:191342400-191342800 Enhancers Duodenum Mucosa Duodenum
38 chr2:191342400-191342800 Enhancers Fetal Lung lung
39 chr2:191342400-191343000 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:191342400-191343000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr2:191342400-191343000 Enhancers Colon Smooth Muscle Colon
42 chr2:191342400-191343200 Enhancers Brain Germinal Matrix brain
43 chr2:191342400-191343200 Active TSS Brain Inferior Temporal Lobe brain
44 chr2:191342400-191343400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:191342400-191343400 Active TSS Brain Hippocampus Middle brain
46 chr2:191342400-191343400 Active TSS Pancreatic Islets Pancreatic Islet
47 chr2:191342400-191343600 Flanking Active TSS Brain Anterior Caudate brain
48 chr2:191342400-191343600 Enhancers Fetal Stomach stomach
49 chr2:191342400-191343600 Enhancers K562 blood
50 chr2:191342400-191343800 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015