Variant report

Variant rs12704989
Chromosome Location chr7:98029438-98029439
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:98027600-98029600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr7:98027600-98030600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr7:98027800-98030400 Active TSS Fetal Intestine Small intestine
4 chr7:98027800-98030400 Active TSS Rectal Mucosa Donor 29 rectum
5 chr7:98027800-98030400 Active TSS Stomach Mucosa stomach
6 chr7:98027800-98030800 Active TSS iPS-20b Cell Line embryonic stem cell
7 chr7:98027800-98031000 Active TSS Pancreatic Islets Pancreatic Islet
8 chr7:98028000-98030000 Active TSS Colonic Mucosa Colon
9 chr7:98028000-98031000 Active TSS Rectal Smooth Muscle rectum
10 chr7:98028400-98030000 Active TSS Fetal Intestine Large intestine
11 chr7:98028400-98030600 Active TSS HUES6 Cell Line embryonic stem cell
12 chr7:98028400-98030600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr7:98028400-98030600 Active TSS Duodenum Mucosa Duodenum
14 chr7:98028400-98030600 Active TSS HMEC breast
15 chr7:98028400-98030800 Active TSS H1 Cell Line embryonic stem cell
16 chr7:98028400-98030800 Active TSS Rectal Mucosa Donor 31 rectum
17 chr7:98028400-98030800 Active TSS A549 lung
18 chr7:98028600-98030400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr7:98028600-98030400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr7:98028600-98030400 Active TSS NHEK skin
21 chr7:98028600-98030800 Active TSS HepG2 liver
22 chr7:98028600-98030800 Active TSS K562 blood
23 chr7:98028600-98031000 Active TSS H9 Cell Line embryonic stem cell
24 chr7:98028600-98031000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr7:98028600-98031000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
26 chr7:98028800-98030800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr7:98028800-98031000 Active TSS iPS-15b Cell Line embryonic stem cell
28 chr7:98028800-98031000 Active TSS Breast Myoepithelial Primary Cells Breast
29 chr7:98029000-98029600 Flanking Active TSS Liver Liver
30 chr7:98029000-98029800 Active TSS Right Atrium heart
31 chr7:98029000-98030000 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr7:98029000-98030000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
33 chr7:98029000-98030000 Active TSS Psoas Muscle Psoas
34 chr7:98029000-98030200 Active TSS Fetal Kidney kidney
35 chr7:98029000-98030600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr7:98029000-98030600 Active TSS Esophagus oesophagus
37 chr7:98029000-98030800 Active TSS Hela-S3 cervix
38 chr7:98029000-98031000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
39 chr7:98029200-98029600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr7:98029200-98029600 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
41 chr7:98029200-98029600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr7:98029200-98029600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
43 chr7:98029200-98029600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
44 chr7:98029200-98029600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
45 chr7:98029200-98029600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
46 chr7:98029200-98029600 Flanking Active TSS Placenta Placenta
47 chr7:98029200-98029600 Flanking Active TSS Left Ventricle heart
48 chr7:98029200-98029600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
49 chr7:98029200-98029600 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
50 chr7:98029200-98029600 Flanking Active TSS GM12878-XiMat blood

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