Variant report

Variant rs71563562
Chromosome Location chr7:98001241-98001242
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:97977200-98010200 Weak transcription GM12878-XiMat blood
2 chr7:97984800-98002200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:97990400-98017200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr7:97990400-98028000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr7:97990600-98010400 Weak transcription HepG2 liver
6 chr7:97991000-98002200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr7:97992000-98029400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr7:97992800-98017400 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr7:97993800-98005400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr7:97995600-98002400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr7:97995600-98002400 Weak transcription NH-A brain
12 chr7:97995800-98028200 Weak transcription Esophagus oesophagus
13 chr7:97996200-98002800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr7:97998200-98003200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr7:97998800-98002000 Weak transcription Fetal Muscle Trunk muscle
16 chr7:97998800-98002000 Weak transcription Fetal Muscle Leg muscle
17 chr7:97998800-98008000 Weak transcription Gastric stomach
18 chr7:97999200-98002000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr7:97999200-98005600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr7:97999600-98005400 Weak transcription H1 Cell Line embryonic stem cell
21 chr7:98000200-98001400 Enhancers Fetal Intestine Large intestine
22 chr7:98000200-98002600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr7:98000200-98002800 Enhancers Pancreas Pancrea
24 chr7:98000200-98003600 Enhancers HMEC breast
25 chr7:98000400-98001400 Active TSS Duodenum Mucosa Duodenum
26 chr7:98000600-98001400 Active TSS Hela-S3 cervix
27 chr7:98000600-98002200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr7:98000600-98004000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr7:98000800-98001400 Active TSS Liver Liver
30 chr7:98000800-98002000 Weak transcription HSMM muscle
31 chr7:98000800-98002200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr7:98001000-98001400 Active TSS Placenta Placenta
33 chr7:98001000-98001600 Weak transcription Stomach Mucosa stomach
34 chr7:98001000-98002000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:98001000-98002200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr7:98001000-98002200 Weak transcription A549 lung
37 chr7:98001000-98002200 Weak transcription HSMMtube muscle
38 chr7:98001200-98001600 Weak transcription NHEK skin
39 chr7:98001200-98001800 ZNF genes & repeats Fetal Intestine Small intestine
40 chr7:98001200-98002200 Weak transcription Muscle Satellite Cultured Cells --
41 chr7:98001200-98002200 Weak transcription Osteobl bone

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