Variant report

Variant rs6945554
Chromosome Location chr7:97972946-97972947
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:97944800-97983400 Weak transcription HepG2 liver
2 chr7:97953200-97978000 Weak transcription Lung lung
3 chr7:97953200-97978200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:97953800-97989800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr7:97954000-97980400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr7:97954400-97983800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr7:97958800-97981400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr7:97960200-97978400 Weak transcription Fetal Stomach stomach
9 chr7:97966800-97983800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr7:97968000-97982000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr7:97968200-97978200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr7:97968400-97983600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr7:97969200-97973000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr7:97969200-97978000 Weak transcription Gastric stomach
15 chr7:97969200-97978000 Weak transcription Hela-S3 cervix
16 chr7:97969200-97980600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr7:97969200-97981400 Weak transcription Fetal Intestine Large intestine
18 chr7:97969200-97981800 Weak transcription Colonic Mucosa Colon
19 chr7:97969400-97975800 Weak transcription GM12878-XiMat blood
20 chr7:97969400-97978000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr7:97969400-97978000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr7:97969400-97978000 Weak transcription Esophagus oesophagus
23 chr7:97969400-97978000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr7:97969400-97978000 Weak transcription NHEK skin
25 chr7:97969400-97979200 Weak transcription HMEC breast
26 chr7:97971000-97975800 Weak transcription A549 lung
27 chr7:97971000-97976000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr7:97971000-97976000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr7:97971200-97975800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr7:97971200-97981600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr7:97971200-97981600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr7:97971200-97981600 Weak transcription Osteobl bone
33 chr7:97971600-97973400 Enhancers Stomach Mucosa stomach
34 chr7:97972400-97973000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr7:97972400-97979800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr7:97972400-97983400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr7:97972600-97973000 Weak transcription Pancreas Pancrea
38 chr7:97972600-97973200 Enhancers Fetal Intestine Small intestine
39 chr7:97972800-97973000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr7:97972800-97973000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr7:97972800-97973000 Enhancers Liver Liver
42 chr7:97972800-97973600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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