Variant report

Variant rs3801251
Chromosome Location chr7:98027618-98027619
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:97990400-98028000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:97992000-98029400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr7:97995800-98028200 Weak transcription Esophagus oesophagus
4 chr7:98007400-98028000 Weak transcription Fetal Stomach stomach
5 chr7:98017600-98027800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr7:98017800-98028000 Weak transcription Pancreas Pancrea
7 chr7:98018000-98028000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr7:98018600-98028000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr7:98018800-98028000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr7:98022000-98028000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:98022000-98029200 Weak transcription Placenta Placenta
12 chr7:98023800-98027800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr7:98024000-98027800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr7:98024200-98028200 Weak transcription NH-A brain
15 chr7:98024400-98028000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr7:98024400-98028000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr7:98024400-98028000 Weak transcription Fetal Muscle Leg muscle
18 chr7:98025000-98027800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr7:98025000-98029000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr7:98025200-98028400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr7:98025400-98028000 Weak transcription Colonic Mucosa Colon
22 chr7:98026000-98027800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr7:98026000-98027800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr7:98026400-98027800 Weak transcription Stomach Mucosa stomach
25 chr7:98026600-98028000 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr7:98027000-98028000 Enhancers NHDF-Ad bronchial
27 chr7:98027000-98028200 Active TSS GM12878-XiMat blood
28 chr7:98027200-98027800 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr7:98027200-98027800 Weak transcription Liver Liver
30 chr7:98027200-98028000 Enhancers HepG2 liver
31 chr7:98027200-98029000 Weak transcription Right Atrium heart
32 chr7:98027400-98027800 Enhancers Fetal Intestine Large intestine
33 chr7:98027400-98027800 Enhancers Fetal Intestine Small intestine
34 chr7:98027400-98027800 Active TSS HMEC breast
35 chr7:98027600-98027800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr7:98027600-98027800 Enhancers Sigmoid Colon Sigmoid Colon
37 chr7:98027600-98027800 Enhancers K562 blood
38 chr7:98027600-98028000 Enhancers HUES64 Cell Line embryonic stem cell
39 chr7:98027600-98028000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr7:98027600-98028000 Weak transcription Duodenum Mucosa Duodenum
41 chr7:98027600-98028000 Enhancers Hela-S3 cervix
42 chr7:98027600-98028200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr7:98027600-98028200 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr7:98027600-98028200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr7:98027600-98028400 Flanking Active TSS A549 lung
46 chr7:98027600-98028600 Flanking Active TSS NHEK skin
47 chr7:98027600-98029600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr7:98027600-98030600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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