The 2.0 version of rSNPBase

Variant report

Variant rs1273755
Chromosome Location chr6:121479828-121479829
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:121472600-121481600 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:121473400-121480600 Weak transcription Small Intestine intestine
3 chr6:121473400-121499000 Weak transcription Right Ventricle heart
4 chr6:121474200-121483400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr6:121474400-121483200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr6:121474400-121483400 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr6:121474600-121481400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr6:121474600-121485200 Weak transcription Rectal Smooth Muscle rectum
9 chr6:121474600-121508600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:121474800-121484000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr6:121475000-121482400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr6:121475200-121481400 Weak transcription Brain Germinal Matrix brain
13 chr6:121475400-121480400 Weak transcription Primary B cells from cord blood blood
14 chr6:121475400-121483000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr6:121475600-121480200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:121475600-121480400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr6:121475600-121480600 Weak transcription Aorta Aorta
18 chr6:121475600-121481000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr6:121475600-121481400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:121475600-121481400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:121475600-121481800 Weak transcription Pancreas Pancrea
22 chr6:121475600-121482400 Weak transcription Placenta Placenta
23 chr6:121475600-121483600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr6:121475600-121508600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:121475800-121483600 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr6:121477000-121482200 Weak transcription Fetal Heart heart
27 chr6:121477400-121482000 Weak transcription Fetal Kidney kidney
28 chr6:121477400-121485000 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr6:121477600-121481600 Weak transcription Esophagus oesophagus
30 chr6:121478000-121480800 Strong transcription Liver Liver
31 chr6:121478200-121480200 ZNF genes & repeats Fetal Lung lung
32 chr6:121478200-121480800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:121478400-121480400 ZNF genes & repeats Primary B cells from peripheral blood blood
34 chr6:121478400-121480400 Strong transcription Adipose Nuclei Adipose
35 chr6:121478400-121482600 Weak transcription Brain Angular Gyrus brain
36 chr6:121478600-121480200 ZNF genes & repeats Left Ventricle heart
37 chr6:121478600-121480200 ZNF genes & repeats Ovary ovary
38 chr6:121478600-121480400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:121478600-121480800 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr6:121478600-121480800 Strong transcription Primary T cells fromperipheralblood blood
41 chr6:121478600-121481000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr6:121478800-121480000 Weak transcription Fetal Muscle Trunk muscle
43 chr6:121478800-121480200 Strong transcription Duodenum Smooth Muscle Duodenum
44 chr6:121478800-121480600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:121478800-121480800 Strong transcription Fetal Intestine Large intestine
46 chr6:121478800-121481000 Strong transcription Primary T cells from cord blood blood
47 chr6:121478800-121484000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:121478800-121535400 Weak transcription Brain Cingulate Gyrus brain
49 chr6:121479000-121480200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr6:121479000-121480200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015