The 2.0 version of rSNPBase

Variant report

Variant rs12746851
Chromosome Location chr1:59132310-59132311
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59115000-59132800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:59115600-59138400 Weak transcription Small Intestine intestine
3 chr1:59116000-59151600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:59116400-59137800 Weak transcription Fetal Heart heart
5 chr1:59117800-59147600 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr1:59118000-59139000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:59118600-59147400 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr1:59119000-59135200 Strong transcription Primary monocytes fromperipheralblood blood
10 chr1:59119800-59147600 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr1:59119800-59155000 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr1:59119800-59162200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:59119800-59163200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:59120000-59143000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:59120000-59153400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:59120200-59149400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:59121000-59161200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:59121200-59141600 Strong transcription Primary B cells from cord blood blood
19 chr1:59121400-59134800 Strong transcription Placenta Placenta
20 chr1:59121400-59145400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:59121400-59161000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:59121600-59134200 Strong transcription Duodenum Mucosa Duodenum
23 chr1:59121600-59139800 Weak transcription Hela-S3 cervix
24 chr1:59121600-59141600 Strong transcription NH-A brain
25 chr1:59121600-59142200 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:59121600-59143000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:59121600-59143000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:59121600-59147400 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr1:59121600-59148400 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr1:59121600-59150000 Strong transcription Primary B cells from peripheral blood blood
31 chr1:59121600-59150000 Strong transcription Primary T cells fromperipheralblood blood
32 chr1:59121600-59150600 Strong transcription Liver Liver
33 chr1:59121600-59161200 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr1:59121600-59161200 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:59121800-59134600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
36 chr1:59122200-59153400 Weak transcription Esophagus oesophagus
37 chr1:59122400-59138400 Weak transcription Lung lung
38 chr1:59122400-59153200 Weak transcription Gastric stomach
39 chr1:59122400-59153200 Weak transcription Pancreas Pancrea
40 chr1:59122400-59155200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr1:59122400-59159400 Weak transcription Right Ventricle heart
42 chr1:59122800-59133400 Strong transcription GM12878-XiMat blood
43 chr1:59122800-59141800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:59123000-59134600 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:59123400-59153800 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr1:59123600-59134800 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr1:59123800-59161800 Strong transcription Dnd41 blood
48 chr1:59124000-59156600 Weak transcription Spleen Spleen
49 chr1:59124200-59134600 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr1:59125000-59135400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015