The 2.0 version of rSNPBase

Variant report

Variant rs232785
Chromosome Location chr1:59129973-59129974
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59102000-59130400 Weak transcription Aorta Aorta
2 chr1:59108200-59130400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:59114400-59130200 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:59115000-59132800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:59115600-59138400 Weak transcription Small Intestine intestine
6 chr1:59116000-59151600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:59116400-59137800 Weak transcription Fetal Heart heart
8 chr1:59116800-59131400 Weak transcription Fetal Stomach stomach
9 chr1:59117800-59147600 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr1:59118000-59139000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:59118200-59130400 Weak transcription Brain Anterior Caudate brain
12 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:59118400-59130000 Weak transcription Brain Cingulate Gyrus brain
14 chr1:59118600-59147400 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr1:59118800-59130200 Weak transcription Brain Angular Gyrus brain
16 chr1:59118800-59130400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:59119000-59135200 Strong transcription Primary monocytes fromperipheralblood blood
18 chr1:59119200-59130400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:59119800-59147600 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr1:59119800-59155000 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr1:59119800-59162200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:59119800-59163200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:59120000-59143000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:59120000-59153400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:59120200-59149400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:59121000-59161200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:59121200-59130400 Strong transcription Adipose Nuclei Adipose
28 chr1:59121200-59141600 Strong transcription Primary B cells from cord blood blood
29 chr1:59121400-59134800 Strong transcription Placenta Placenta
30 chr1:59121400-59145400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:59121400-59161000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:59121600-59130200 Strong transcription NHDF-Ad bronchial
33 chr1:59121600-59130800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:59121600-59130800 Strong transcription Osteobl bone
35 chr1:59121600-59131400 Strong transcription Muscle Satellite Cultured Cells --
36 chr1:59121600-59134200 Strong transcription Duodenum Mucosa Duodenum
37 chr1:59121600-59139800 Weak transcription Hela-S3 cervix
38 chr1:59121600-59141600 Strong transcription NH-A brain
39 chr1:59121600-59142200 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:59121600-59143000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:59121600-59143000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:59121600-59147400 Strong transcription iPS-18 Cell Line embryonic stem cell
43 chr1:59121600-59148400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:59121600-59150000 Strong transcription Primary B cells from peripheral blood blood
45 chr1:59121600-59150000 Strong transcription Primary T cells fromperipheralblood blood
46 chr1:59121600-59150600 Strong transcription Liver Liver
47 chr1:59121600-59161200 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr1:59121600-59161200 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:59121800-59130800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:59121800-59134600 Strong transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015