The 2.0 version of rSNPBase

Variant report

Variant rs232876
Chromosome Location chr1:59115781-59115782
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59096000-59121600 Weak transcription HUVEC blood vessel
2 chr1:59096600-59121600 Weak transcription Gastric stomach
3 chr1:59102000-59130400 Weak transcription Aorta Aorta
4 chr1:59108200-59130400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:59108600-59121600 Weak transcription Duodenum Mucosa Duodenum
6 chr1:59109000-59121600 Weak transcription HepG2 liver
7 chr1:59109400-59121600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:59109600-59117800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:59109800-59115800 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:59110400-59121600 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:59110400-59123600 Weak transcription HSMMtube muscle
12 chr1:59110600-59119200 Weak transcription Placenta Placenta
13 chr1:59110800-59125200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:59111600-59118200 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:59112400-59121600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:59112600-59116200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:59112800-59125600 Weak transcription NHLF lung
18 chr1:59114200-59115800 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr1:59114200-59115800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:59114200-59117600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:59114400-59115800 Enhancers Primary T cells fromperipheralblood blood
22 chr1:59114400-59115800 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr1:59114400-59115800 Enhancers Primary T killer naive cells fromperipheralblood blood
24 chr1:59114400-59115800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:59114400-59116200 Enhancers Primary neutrophils fromperipheralblood blood
26 chr1:59114400-59121600 Weak transcription Fetal Muscle Leg muscle
27 chr1:59114400-59130200 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:59114600-59115800 Enhancers Primary T helper cells fromperipheralblood blood
29 chr1:59114600-59116600 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr1:59114600-59116600 Weak transcription Dnd41 blood
31 chr1:59114600-59121600 Weak transcription Fetal Muscle Trunk muscle
32 chr1:59114800-59116000 Enhancers Primary T helper cells PMA-I stimulated --
33 chr1:59114800-59116200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:59115000-59117600 Weak transcription HSMM muscle
35 chr1:59115000-59122800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:59115000-59132800 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:59115200-59115800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:59115200-59115800 Enhancers Esophagus oesophagus
39 chr1:59115200-59115800 Enhancers Left Ventricle heart
40 chr1:59115200-59115800 Enhancers Pancreas Pancrea
41 chr1:59115200-59115800 Enhancers Right Ventricle heart
42 chr1:59115200-59116000 Enhancers Brain Hippocampus Middle brain
43 chr1:59115200-59116000 Enhancers Stomach Mucosa stomach
44 chr1:59115200-59119200 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:59115200-59121600 Weak transcription Primary T cells from cord blood blood
46 chr1:59115400-59115800 Enhancers Primary B cells from cord blood blood
47 chr1:59115400-59115800 Enhancers Adipose Nuclei Adipose
48 chr1:59115400-59115800 Enhancers Ovary ovary
49 chr1:59115400-59115800 Enhancers Skeletal Muscle Female skeletal muscle
50 chr1:59115400-59116000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015