The 2.0 version of rSNPBase

Variant report

Variant rs232853
Chromosome Location chr1:59121768-59121769
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59102000-59130400 Weak transcription Aorta Aorta
2 chr1:59108200-59130400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:59110400-59123600 Weak transcription HSMMtube muscle
4 chr1:59110800-59125200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:59112800-59125600 Weak transcription NHLF lung
6 chr1:59114400-59130200 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:59115000-59122800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:59115000-59132800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:59115400-59123800 Weak transcription Colon Smooth Muscle Colon
10 chr1:59115600-59121800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:59115600-59123000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:59115600-59124400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:59115600-59138400 Weak transcription Small Intestine intestine
14 chr1:59115800-59121800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:59115800-59121800 Weak transcription Left Ventricle heart
16 chr1:59115800-59123000 Weak transcription Psoas Muscle Psoas
17 chr1:59115800-59124800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:59115800-59125000 Weak transcription Fetal Brain Female brain
19 chr1:59115800-59129800 Weak transcription Brain Germinal Matrix brain
20 chr1:59116000-59121800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:59116000-59123400 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr1:59116000-59129200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:59116000-59129200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:59116000-59151600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:59116400-59121800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:59116400-59123600 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:59116400-59125200 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr1:59116400-59137800 Weak transcription Fetal Heart heart
29 chr1:59116800-59131400 Weak transcription Fetal Stomach stomach
30 chr1:59117000-59125200 Weak transcription Fetal Kidney kidney
31 chr1:59117800-59147600 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr1:59118000-59139000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:59118200-59121800 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:59118200-59121800 Weak transcription HMEC breast
35 chr1:59118200-59127200 Weak transcription Brain Hippocampus Middle brain
36 chr1:59118200-59130400 Weak transcription Brain Anterior Caudate brain
37 chr1:59118200-59163400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:59118400-59125400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr1:59118400-59129600 Weak transcription Fetal Brain Male brain
40 chr1:59118400-59129600 Weak transcription Stomach Mucosa stomach
41 chr1:59118400-59130000 Weak transcription Brain Cingulate Gyrus brain
42 chr1:59118600-59122200 Weak transcription A549 lung
43 chr1:59118600-59147400 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr1:59118800-59130200 Weak transcription Brain Angular Gyrus brain
45 chr1:59118800-59130400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:59119000-59135200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr1:59119200-59130400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:59119800-59147600 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr1:59119800-59155000 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr1:59119800-59162200 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015