The 2.0 version of rSNPBase

Variant report

Variant rs34941709
Chromosome Location chr1:59116553-59116554
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59096000-59121600 Weak transcription HUVEC blood vessel
2 chr1:59096600-59121600 Weak transcription Gastric stomach
3 chr1:59102000-59130400 Weak transcription Aorta Aorta
4 chr1:59108200-59130400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:59108600-59121600 Weak transcription Duodenum Mucosa Duodenum
6 chr1:59109000-59121600 Weak transcription HepG2 liver
7 chr1:59109400-59121600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:59109600-59117800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:59110400-59121600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:59110400-59123600 Weak transcription HSMMtube muscle
11 chr1:59110600-59119200 Weak transcription Placenta Placenta
12 chr1:59110800-59125200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:59111600-59118200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:59112400-59121600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:59112800-59125600 Weak transcription NHLF lung
16 chr1:59114200-59117600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:59114400-59121600 Weak transcription Fetal Muscle Leg muscle
18 chr1:59114400-59130200 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:59114600-59116600 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:59114600-59116600 Weak transcription Dnd41 blood
21 chr1:59114600-59121600 Weak transcription Fetal Muscle Trunk muscle
22 chr1:59115000-59117600 Weak transcription HSMM muscle
23 chr1:59115000-59122800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:59115000-59132800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:59115200-59119200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:59115200-59121600 Weak transcription Primary T cells from cord blood blood
27 chr1:59115400-59116600 Weak transcription K562 blood
28 chr1:59115400-59118000 Weak transcription Brain Cingulate Gyrus brain
29 chr1:59115400-59118000 Weak transcription Stomach Smooth Muscle stomach
30 chr1:59115400-59121400 Weak transcription Primary hematopoietic stem cells blood
31 chr1:59115400-59121600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:59115400-59121600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:59115400-59123800 Weak transcription Colon Smooth Muscle Colon
34 chr1:59115600-59116600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:59115600-59117800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:59115600-59117800 Weak transcription Brain Substantia Nigra brain
37 chr1:59115600-59121600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:59115600-59121600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:59115600-59121600 Weak transcription Thymus Thymus
40 chr1:59115600-59121800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr1:59115600-59123000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:59115600-59124400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr1:59115600-59138400 Weak transcription Small Intestine intestine
44 chr1:59115800-59116600 Enhancers NHDF-Ad bronchial
45 chr1:59115800-59117800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:59115800-59117800 Weak transcription HMEC breast
47 chr1:59115800-59119000 Weak transcription Adipose Nuclei Adipose
48 chr1:59115800-59119800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:59115800-59120000 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:59115800-59121000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015