Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11592603	0.90[EUR][1000 genomes]
rs11598756	0.91[EUR][1000 genomes]
rs11599175	0.88[EUR][1000 genomes]
rs11599195	0.90[EUR][1000 genomes]
rs11599693	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11599695	0.90[EUR][1000 genomes]
rs11599719	0.90[EUR][1000 genomes]
rs12777014	0.90[EUR][1000 genomes]
rs12781669	0.90[EUR][1000 genomes]
rs17124878	0.91[EUR][1000 genomes]
rs2482579	0.91[EUR][1000 genomes]
rs34256039	0.90[EUR][1000 genomes]
rs34642130	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35165947	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35284210	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35573175	1.00[EUR][1000 genomes]
rs36096694	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4537698	0.90[EUR][1000 genomes]
rs7091879	0.91[EUR][1000 genomes]
rs7095639	0.91[EUR][1000 genomes]
rs71479218	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs71479221	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831983	chr10:110267919-110467318	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1050244	chr10:110279647-110779693	Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	esv2761624	chr10:110303323-110411575	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv895990	chr10:110354980-110452911	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv975821	chr10:110362115-110404095	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv825562	chr10:110375607-110430501	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:110389000-110395000	Enhancers	Fetal Lung	lung
2	chr10:110389800-110392400	Enhancers	Primary B cells from peripheral blood	blood
3	chr10:110390000-110392800	Enhancers	GM12878-XiMat	blood
4	chr10:110390600-110392400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:110391400-110392400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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