Variant report

Variant	rs1277763
Chromosome Location	chr10:18495885-18495886
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1277729	0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs1277767	0.94[CHB][hapmap];0.84[JPT][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1277768	0.81[JPT][hapmap]
rs1539680	0.87[CEU][hapmap];0.94[CHB][hapmap];0.85[JPT][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1573221	0.81[JPT][hapmap]
rs1573222	0.82[JPT][hapmap]
rs1757215	0.86[EUR][1000 genomes]
rs2482113	0.80[EUR][1000 genomes]
rs2482117	0.85[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2482118	0.87[CEU][hapmap];0.94[CHB][hapmap];0.85[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2489205	0.87[CEU][hapmap];0.94[CHB][hapmap];0.85[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2489206	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
3	chr10:18493200-18497800	Weak transcription	Fetal Heart	heart
4	chr10:18493800-18497600	Weak transcription	Colon Smooth Muscle	Colon
5	chr10:18493800-18503800	Weak transcription	Fetal Brain Male	brain
6	chr10:18494000-18497600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr10:18494200-18497800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr10:18494200-18499600	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr10:18494400-18503600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:18494800-18497800	Weak transcription	Rectal Smooth Muscle	rectum
11	chr10:18495000-18497000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:18495200-18501400	Weak transcription	Stomach Smooth Muscle	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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