Variant report

Variant	rs2482117
Chromosome Location	chr10:18506017-18506018
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1277729	0.94[CEU][hapmap];0.85[GIH][hapmap];0.94[TSI][hapmap];0.86[EUR][1000 genomes]
rs1277763	0.85[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1277767	0.82[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap];0.95[MEX][hapmap];0.86[TSI][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1539680	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1757215	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2482113	0.83[EUR][1000 genomes]
rs2482118	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2489205	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2489206	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18499200-18511000	Weak transcription	Aorta	Aorta
2	chr10:18502400-18513600	Weak transcription	Right Ventricle	heart
3	chr10:18504400-18506400	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr10:18504400-18506600	Weak transcription	Left Ventricle	heart
5	chr10:18504400-18508400	Weak transcription	Brain Anterior Caudate	brain
6	chr10:18504400-18510400	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr10:18504800-18506200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr10:18504800-18513400	Weak transcription	Rectal Smooth Muscle	rectum
9	chr10:18505400-18513400	Weak transcription	Colon Smooth Muscle	Colon
10	chr10:18505600-18506600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr10:18505600-18506600	Weak transcription	Ovary	ovary
12	chr10:18505600-18508400	Weak transcription	Stomach Smooth Muscle	stomach
13	chr10:18505800-18506200	Weak transcription	Fetal Heart	heart
14	chr10:18506000-18506200	Enhancers	Pancreas	Pancrea
15	chr10:18506000-18512800	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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