Variant report

Variant	rs1277767
Chromosome Location	chr10:18498398-18498399
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1277729	0.86[MEX][hapmap];0.86[MKK][hapmap];0.86[TSI][hapmap];0.80[EUR][1000 genomes]
rs1277763	0.94[CHB][hapmap];0.84[JPT][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1539680	0.82[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1757215	0.80[ASN][1000 genomes]
rs2482117	0.82[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap];0.95[MEX][hapmap];0.86[TSI][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2482118	0.82[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2489205	0.82[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2489206	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
3	chr10:18493800-18503800	Weak transcription	Fetal Brain Male	brain
4	chr10:18494200-18499600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr10:18494400-18503600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr10:18495200-18501400	Weak transcription	Stomach Smooth Muscle	stomach
7	chr10:18497600-18498400	Enhancers	Colon Smooth Muscle	Colon
8	chr10:18497600-18499200	Enhancers	Primary hematopoietic stem cells	blood
9	chr10:18497800-18498600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr10:18497800-18499200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr10:18497800-18503000	Enhancers	Fetal Heart	heart
12	chr10:18498000-18498400	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr10:18498000-18498400	Weak transcription	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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