The 2.0 version of rSNPBase

Variant report

Variant rs12781566
Chromosome Location chr10:112561856-112561857
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:112540800-112562400 Weak transcription Gastric stomach
2 chr10:112546600-112562400 Weak transcription Esophagus oesophagus
3 chr10:112546600-112563800 Weak transcription Lung lung
4 chr10:112551600-112562000 Weak transcription Fetal Intestine Small intestine
5 chr10:112554800-112562000 Weak transcription Stomach Smooth Muscle stomach
6 chr10:112555200-112562000 Weak transcription Psoas Muscle Psoas
7 chr10:112555200-112562000 Weak transcription Right Atrium heart
8 chr10:112555200-112562200 Weak transcription Fetal Muscle Leg muscle
9 chr10:112555200-112562400 Weak transcription Fetal Muscle Trunk muscle
10 chr10:112555400-112562000 Weak transcription Duodenum Mucosa Duodenum
11 chr10:112555800-112563800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr10:112555800-112563800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr10:112557400-112563600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr10:112557600-112563800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr10:112558000-112570200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr10:112558000-112578400 Weak transcription Aorta Aorta
17 chr10:112559400-112562200 Weak transcription HSMM muscle
18 chr10:112559400-112567200 Weak transcription Right Ventricle heart
19 chr10:112560200-112562200 Weak transcription Left Ventricle heart
20 chr10:112560200-112562800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr10:112560200-112563800 Weak transcription K562 blood
22 chr10:112560200-112564000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr10:112560800-112562200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr10:112560800-112562200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr10:112560800-112562800 Enhancers Fetal Heart heart
26 chr10:112561600-112562000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr10:112561600-112562000 Genic enhancers HSMMtube muscle
28 chr10:112561600-112562200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr10:112561600-112562200 Enhancers GM12878-XiMat blood
30 chr10:112561600-112562200 Enhancers Osteobl bone
31 chr10:112561600-112564000 Enhancers Hela-S3 cervix
32 chr10:112561600-112564400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr10:112561600-112564400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr10:112561600-112564400 Enhancers Duodenum Smooth Muscle Duodenum
35 chr10:112561600-112564400 Enhancers Rectal Smooth Muscle rectum
36 chr10:112561600-112565600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr10:112561800-112562000 Active TSS Primary T helper naive cells from peripheral blood blood
38 chr10:112561800-112562000 Bivalent Enhancer Thymus Thymus
39 chr10:112561800-112562200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr10:112561800-112562200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr10:112561800-112562200 Enhancers Muscle Satellite Cultured Cells --
42 chr10:112561800-112562400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr10:112561800-112562400 Enhancers Primary T helper cells PMA-I stimulated --
44 chr10:112561800-112562400 Enhancers Brain Hippocampus Middle brain
45 chr10:112561800-112562400 Enhancers Brain Substantia Nigra brain
46 chr10:112561800-112562800 Enhancers Fetal Lung lung
47 chr10:112561800-112563000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
48 chr10:112561800-112563200 Enhancers Primary T helper naive cells fromperipheralblood blood
49 chr10:112561800-112563400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr10:112561800-112563400 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015