Variant report

Variant rs12786929
Chromosome Location chr11:15864241-15864242
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:15853000-15866600 Weak transcription Left Ventricle heart
2 chr11:15854200-15866600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr11:15858000-15865000 Weak transcription Fetal Muscle Trunk muscle
4 chr11:15858800-15865200 Weak transcription Psoas Muscle Psoas
5 chr11:15860800-15868000 Enhancers Cortex derived primary cultured neurospheres brain
6 chr11:15861000-15864800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:15861400-15864400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr11:15862200-15864600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr11:15862200-15864800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr11:15862200-15865200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr11:15862200-15865400 Weak transcription Brain Angular Gyrus brain
12 chr11:15862600-15866000 Enhancers Fetal Muscle Leg muscle
13 chr11:15862800-15866400 Enhancers Fetal Lung lung
14 chr11:15862800-15866800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:15863000-15868400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr11:15863200-15864600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr11:15863200-15867200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:15863400-15864600 Weak transcription Duodenum Mucosa Duodenum
19 chr11:15863400-15865600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr11:15863400-15865600 Enhancers Fetal Heart heart
21 chr11:15863400-15865800 Enhancers Stomach Smooth Muscle stomach
22 chr11:15863600-15864800 Weak transcription Fetal Brain Male brain
23 chr11:15863600-15865400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr11:15863600-15866000 Enhancers Fetal Stomach stomach
25 chr11:15863600-15867800 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr11:15863800-15865000 Weak transcription NH-A brain
27 chr11:15863800-15867800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr11:15864000-15865000 Enhancers Brain Germinal Matrix brain
29 chr11:15864000-15865200 Weak transcription Right Ventricle heart
30 chr11:15864000-15865200 Weak transcription Stomach Mucosa stomach
31 chr11:15864000-15865200 Weak transcription NHEK skin
32 chr11:15864000-15866800 Enhancers Brain Cingulate Gyrus brain
33 chr11:15864000-15867000 Enhancers HUES64 Cell Line embryonic stem cell
34 chr11:15864000-15867800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr11:15864000-15867800 Enhancers Brain Substantia Nigra brain
36 chr11:15864200-15864400 Enhancers H9 Cell Line embryonic stem cell
37 chr11:15864200-15864800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr11:15864200-15865200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:15864200-15865600 Enhancers Right Atrium heart
40 chr11:15864200-15865800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr11:15864200-15867600 Enhancers H1 Cell Line embryonic stem cell
42 chr11:15864200-15867800 Enhancers HUES48 Cell Line embryonic stem cell

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