Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10498583	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11626130	0.81[GIH][hapmap]
rs11846871	0.82[ASN][1000 genomes]
rs1449414	0.82[ASN][1000 genomes]
rs1562696	0.81[ASN][1000 genomes]
rs1667498	0.81[ASN][1000 genomes]
rs1767418	0.81[ASN][1000 genomes]
rs17796669	0.85[CHB][hapmap]
rs17796693	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34144829	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34880356	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34980802	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs36073512	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6574806	0.81[ASN][1000 genomes]
rs6574807	0.85[ASN][1000 genomes]
rs7158452	0.82[ASN][1000 genomes]
rs7160419	0.85[CHB][hapmap]
rs72687585	0.87[ASN][1000 genomes]
rs8008671	0.90[EUR][1000 genomes]
rs8013627	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8017958	0.85[ASN][1000 genomes]
rs8017968	0.85[ASN][1000 genomes]
rs9323754	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85717200-85727800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

Quick Search: